Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   K8Z53_RS21405 Genome accession   NZ_CP083238
Coordinates   4042201..4042791 (-) Length   196 a.a.
NCBI ID   WP_003181328.1    Uniprot ID   A0A1Y0YEF8
Organism   Bacillus licheniformis strain 2709     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 4037201..4047791
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K8Z53_RS21380 (K8Z53_21125) mobB 4037431..4037958 (-) 528 WP_003181336.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  K8Z53_RS21385 (K8Z53_21130) glp 4037925..4039217 (-) 1293 WP_003181335.1 gephyrin-like molybdotransferase Glp -
  K8Z53_RS21390 (K8Z53_21135) - 4039237..4040250 (-) 1014 WP_011197943.1 molybdopterin-synthase adenylyltransferase MoeB -
  K8Z53_RS21395 (K8Z53_21140) - 4040356..4040943 (-) 588 WP_003181331.1 molybdenum cofactor guanylyltransferase -
  K8Z53_RS21400 (K8Z53_21145) - 4041096..4042054 (+) 959 Protein_4169 sporulation protein -
  K8Z53_RS21405 (K8Z53_21150) rok 4042201..4042791 (-) 591 WP_003181328.1 transcriptional regulator Rok Regulator
  K8Z53_RS21410 (K8Z53_21155) - 4043339..4043797 (-) 459 WP_003181327.1 TlpA family protein disulfide reductase -
  K8Z53_RS21415 (K8Z53_21160) ahpA 4043879..4044421 (-) 543 WP_003181325.1 biofilm-specific peroxidase AhpA -
  K8Z53_RS21420 (K8Z53_21165) - 4044715..4044960 (-) 246 WP_003181323.1 YkuS family protein -
  K8Z53_RS21425 (K8Z53_21170) - 4045023..4046147 (-) 1125 WP_003181321.1 N-acetyldiaminopimelate deacetylase -
  K8Z53_RS21430 (K8Z53_21175) dapD 4046216..4046926 (-) 711 WP_003181319.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  K8Z53_RS21435 (K8Z53_21180) - 4047032..4047477 (-) 446 Protein_4176 flavodoxin -

Sequence

Protein


Download         Length: 196 a.a.        Molecular weight: 22665.62 Da        Isoelectric Point: 9.9960

>NTDB_id=605118 K8Z53_RS21405 WP_003181328.1 4042201..4042791(-) (rok) [Bacillus licheniformis strain 2709]
MFNEREALRLRLEQLNEAEVKVIREYQIERDNIYAKLRELDRPSSFNDTKKDFRPERKTESLPVLAELAAQEMKSYQQQQ
QQQPQASQKNQQQTSPQTSSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPN
MTTFMQSLIKMYPEVKKPYRGQYILEGEISTETEQQ

Nucleotide


Download         Length: 591 bp        

>NTDB_id=605118 K8Z53_RS21405 WP_003181328.1 4042201..4042791(-) (rok) [Bacillus licheniformis strain 2709]
ATGTTTAACGAGAGGGAAGCATTGCGTTTAAGATTAGAGCAGCTGAACGAGGCTGAAGTTAAGGTGATTAGGGAGTATCA
AATTGAGCGGGATAACATATATGCAAAGCTGCGTGAATTGGATCGTCCATCCAGCTTTAATGATACAAAAAAAGATTTTC
GCCCGGAGCGTAAAACTGAATCTCTCCCTGTTTTAGCTGAATTGGCTGCACAGGAGATGAAGAGCTACCAGCAACAGCAG
CAACAGCAGCCGCAAGCATCTCAAAAGAACCAGCAGCAGACTTCTCCGCAAACCTCCTCACTGCCTGCCGGAATTCCAGA
TGGAACGACAAGGCGCAGAAGGGGTACAGCACGTCCAGGCTCAAAAGCTGCAAAATTGCGTGAAGCGGCGATTAAAACAT
TAAAACGCCATAATGCGGCCATCAAAAGCTCCGAACTTCAAAAAGAAATCGAAAAAGAGAGCGGACTTGAGATCCCTAAT
ATGACAACCTTTATGCAAAGCCTGATTAAAATGTACCCGGAAGTCAAAAAACCATACCGCGGTCAATATATATTAGAGGG
TGAGATTTCTACTGAGACAGAGCAGCAATAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1Y0YEF8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

83.77

97.449

0.816