Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   K8Z53_RS17290 Genome accession   NZ_CP083238
Coordinates   3289472..3289642 (+) Length   56 a.a.
NCBI ID   WP_031314537.1    Uniprot ID   -
Organism   Bacillus licheniformis strain 2709     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 3284472..3294642
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K8Z53_RS17260 (K8Z53_17075) - 3285339..3286151 (-) 813 WP_061576198.1 undecaprenyl-diphosphate phosphatase -
  K8Z53_RS17265 (K8Z53_17080) - 3286333..3286512 (+) 180 WP_003180573.1 YjzC family protein -
  K8Z53_RS17270 (K8Z53_17085) - 3286584..3286778 (-) 195 WP_009328851.1 YjzD family protein -
  K8Z53_RS17275 (K8Z53_17090) - 3287010..3287744 (+) 735 WP_009328850.1 hypothetical protein -
  K8Z53_RS17280 (K8Z53_17095) - 3287831..3288406 (+) 576 WP_061576199.1 hypothetical protein -
  K8Z53_RS17285 (K8Z53_17100) med 3288493..3289446 (+) 954 WP_044790144.1 BMP family ABC transporter substrate-binding protein Regulator
  K8Z53_RS17290 (K8Z53_17105) comZ 3289472..3289642 (+) 171 WP_031314537.1 ComZ family protein Regulator
  K8Z53_RS17295 (K8Z53_17110) - 3289694..3289933 (-) 240 WP_069500393.1 hypothetical protein -
  K8Z53_RS17300 (K8Z53_17115) - 3290103..3291041 (+) 939 WP_011197763.1 beta-ketoacyl-ACP synthase III -
  K8Z53_RS17305 (K8Z53_17120) fabF 3291063..3292301 (+) 1239 WP_061576201.1 beta-ketoacyl-ACP synthase II -
  K8Z53_RS17310 (K8Z53_17125) - 3292389..3293117 (+) 729 WP_392387298.1 DUF2268 domain-containing protein -
  K8Z53_RS17315 (K8Z53_17130) - 3293301..3294275 (+) 975 WP_061576203.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 56 a.a.        Molecular weight: 6274.27 Da        Isoelectric Point: 3.9646

>NTDB_id=605109 K8Z53_RS17290 WP_031314537.1 3289472..3289642(+) (comZ) [Bacillus licheniformis strain 2709]
MEFLQIAMKYVPEAKEEMEKAGIELSPEMLEPFMNLFTKVMAEAYELGKADAGSDA

Nucleotide


Download         Length: 171 bp        

>NTDB_id=605109 K8Z53_RS17290 WP_031314537.1 3289472..3289642(+) (comZ) [Bacillus licheniformis strain 2709]
ATGGAATTTTTGCAAATTGCCATGAAATACGTTCCGGAAGCGAAAGAAGAGATGGAGAAAGCGGGAATCGAACTTTCGCC
GGAAATGCTTGAGCCGTTCATGAACCTGTTTACAAAAGTGATGGCGGAAGCTTACGAGCTCGGTAAAGCGGACGCCGGTT
CTGACGCCTGA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(1-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

75

100

0.75