Detailed information NTG0605018

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: K9O37_RS08295
• Genome accession: NZ_CP083181
• Coordinates: 1712212..1712913 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594574.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain AB43
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1707212..1717913

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K9O37_RS08260 (K9O37_08250)	kdsB	1707735..1708496 (+)	762	WP_000680701.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
K9O37_RS08265 (K9O37_08255)	-	1708508..1709488 (+)	981	WP_001075418.1	DNA polymerase III subunit delta'	-
K9O37_RS08270 (K9O37_08260)	-	1709500..1709841 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
K9O37_RS08275 (K9O37_08265)	-	1709859..1710632 (+)	774	WP_000497298.1	TatD family hydrolase	-
K9O37_RS08280 (K9O37_08270)	-	1710670..1711278 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
K9O37_RS08285 (K9O37_08275)	-	1711288..1711842 (+)	555	WP_000841379.1	type II secretion system protein	-
K9O37_RS08290 (K9O37_08280)	xcpV	1711832..1712212 (+)	381	WP_004738906.1	type II secretion system minor pseudopilin GspI	Machinery gene
K9O37_RS08295 (K9O37_08285)	xcpW	1712212..1712913 (+)	702	WP_000594574.1	type II secretion system minor pseudopilin GspJ	Machinery gene
K9O37_RS08300 (K9O37_08290)	gspK	1712913..1713872 (+)	960	WP_000301477.1	type II secretion system minor pseudopilin GspK	-
K9O37_RS08305 (K9O37_08295)	-	1714102..1714698 (+)	597	WP_004738911.1	6-pyruvoyl trahydropterin synthase family protein	-
K9O37_RS08310 (K9O37_08300)	ung	1714749..1715462 (+)	714	WP_001177530.1	uracil-DNA glycosylase	-
K9O37_RS08315 (K9O37_08305)	-	1715459..1716583 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
K9O37_RS08320 (K9O37_08310)	tadA	1716590..1717093 (+)	504	WP_031946509.1	tRNA adenosine(34) deaminase TadA	-
K9O37_RS08325 (K9O37_08315)	-	1717163..1717606 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26630.57 Da
• Isoelectric Point: 9.5501

>NTDB_id=605018 K9O37_RS08295 WP_000594574.1 1712212..1712913(+) (xcpW) [Acinetobacter baumannii strain AB43]
MIKNKYIHIRSFAARLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHSALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLNQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=605018 K9O37_RS08295 WP_000594574.1 1712212..1712913(+) (xcpW) [Acinetobacter baumannii strain AB43]
ATGATAAAAAATAAATATATTCACATCCGAAGCTTTGCTGCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATTCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAGTTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAATCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	98.283	100	0.983