Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   NLG45_RS09600 Genome accession   NZ_CP100428
Coordinates   1931375..1932175 (-) Length   266 a.a.
NCBI ID   WP_254414295.1    Uniprot ID   -
Organism   Staphylococcus aureus strain RMSA24     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1926375..1937175
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NLG45_RS09585 (NLG45_09585) pycC 1926670..1927941 (-) 1272 WP_000368660.1 Pycsar phage resistance system cytidylate cyclase PycC -
  NLG45_RS09590 (NLG45_09590) rlmH 1927982..1928461 (-) 480 WP_000704775.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  NLG45_RS09595 (NLG45_09595) adsA 1928829..1931147 (-) 2319 WP_000645751.1 LPXTG-anchored adenosine synthase AdsA -
  NLG45_RS09600 (NLG45_09600) vicX 1931375..1932175 (-) 801 WP_254414295.1 MBL fold metallo-hydrolase Regulator
  NLG45_RS09605 (NLG45_09605) - 1932571..1933359 (-) 789 WP_001104177.1 two-component system regulatory protein YycI -
  NLG45_RS09610 (NLG45_09610) yycH 1933360..1934694 (-) 1335 WP_001060135.1 two-component system activity regulator YycH -
  NLG45_RS09615 (NLG45_09615) walK 1934687..1936513 (-) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30343.61 Da        Isoelectric Point: 6.3392

>NTDB_id=604940 NLG45_RS09600 WP_254414295.1 1931375..1932175(-) (vicX) [Staphylococcus aureus strain RMSA24]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDMGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=604940 NLG45_RS09600 WP_254414295.1 1931375..1932175(-) (vicX) [Staphylococcus aureus strain RMSA24]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACAAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCAATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACGGATATGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGACATGTATCTAATGAGGATGCGGGCCATGCGATGACGGATGTGATTACAGGCAACACGA
AACGTATTTACCTATCACATTTATCACAAGATAATAATATGAAAGATTTGGCGCGTATGAGTGTTGGTCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

48.638

96.617

0.47