Detailed information
Bioinformatically predicted
Overview
| Name | recA | Type | Machinery gene |
| Locus tag | K8Z38_RS25235 | Genome accession | NZ_CP083144 |
| Coordinates | 4847819..4848898 (-) | Length | 359 a.a. |
| NCBI ID | WP_021728000.1 | Uniprot ID | - |
| Organism | Bacillus thuringiensis strain GC-91 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 4840955..4882229 | 4847819..4848898 | within | 0 |
Gene organization within MGE regions
Location: 4840955..4882229
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K8Z38_RS25200 (K8Z38_25165) | - | 4840955..4841938 (+) | 984 | WP_000944665.1 | M23 family metallopeptidase | - |
| K8Z38_RS25205 (K8Z38_25170) | yunB | 4842012..4842743 (-) | 732 | WP_000021802.1 | sporulation protein YunB | - |
| K8Z38_RS25210 (K8Z38_25175) | - | 4842798..4843100 (-) | 303 | WP_000248466.1 | YunC family protein | - |
| K8Z38_RS25215 (K8Z38_25180) | - | 4843166..4844503 (-) | 1338 | WP_229163597.1 | bifunctional UDP-sugar hydrolase/5'-nucleotidase | - |
| K8Z38_RS25220 (K8Z38_25185) | - | 4845142..4846023 (-) | 882 | WP_000446736.1 | IS3 family transposase | - |
| K8Z38_RS25225 (K8Z38_25190) | - | 4846032..4846328 (-) | 297 | WP_000516529.1 | transposase | - |
| K8Z38_RS25230 (K8Z38_25195) | - | 4846900..4847733 (+) | 834 | WP_021728001.1 | hypothetical protein | - |
| K8Z38_RS25235 (K8Z38_25200) | recA | 4847819..4848898 (-) | 1080 | WP_021728000.1 | recombinase RecA | Machinery gene |
| K8Z38_RS25240 (K8Z38_25205) | - | 4849041..4849370 (+) | 330 | WP_021727999.1 | hypothetical protein | - |
| K8Z38_RS25245 (K8Z38_25210) | - | 4849551..4850603 (-) | 1053 | WP_042991587.1 | N-acetylmuramoyl-L-alanine amidase | - |
| K8Z38_RS25250 (K8Z38_25215) | - | 4850600..4850830 (-) | 231 | Protein_4981 | BhlA/UviB family holin-like peptide | - |
| K8Z38_RS25255 (K8Z38_25220) | - | 4850893..4852173 (-) | 1281 | WP_021728058.1 | BppU family phage baseplate upper protein | - |
| K8Z38_RS25260 (K8Z38_25225) | - | 4852188..4854530 (-) | 2343 | WP_021728057.1 | phage tail spike protein | - |
| K8Z38_RS25265 (K8Z38_25230) | - | 4854527..4855210 (-) | 684 | WP_021728056.1 | phage tail domain-containing protein | - |
| K8Z38_RS25270 (K8Z38_25235) | - | 4855212..4859090 (-) | 3879 | WP_042991588.1 | phage tail tape measure protein | - |
| K8Z38_RS25275 (K8Z38_25240) | - | 4859107..4859295 (-) | 189 | WP_006927278.1 | hypothetical protein | - |
| K8Z38_RS25280 (K8Z38_25245) | - | 4859334..4859720 (-) | 387 | WP_000113340.1 | hypothetical protein | - |
| K8Z38_RS25285 (K8Z38_25250) | - | 4859732..4860367 (-) | 636 | WP_042991589.1 | major tail protein | - |
| K8Z38_RS25290 (K8Z38_25255) | - | 4860379..4860756 (-) | 378 | WP_021727769.1 | HK97-gp10 family putative phage morphogenesis protein | - |
| K8Z38_RS25295 (K8Z38_25260) | - | 4860756..4861085 (-) | 330 | WP_021727768.1 | hypothetical protein | - |
| K8Z38_RS25300 (K8Z38_25265) | - | 4861075..4861407 (-) | 333 | WP_001126094.1 | hypothetical protein | - |
| K8Z38_RS25305 (K8Z38_25270) | - | 4861385..4861645 (-) | 261 | WP_000343863.1 | head-tail connector protein | - |
| K8Z38_RS25310 (K8Z38_25275) | - | 4861647..4862975 (-) | 1329 | WP_021727767.1 | phage major capsid protein | - |
| K8Z38_RS25315 (K8Z38_25280) | - | 4862977..4863555 (-) | 579 | WP_001140506.1 | HK97 family phage prohead protease | - |
| K8Z38_RS25320 (K8Z38_25285) | - | 4863524..4864729 (-) | 1206 | WP_021727766.1 | phage portal protein | - |
| K8Z38_RS25325 (K8Z38_25290) | - | 4864834..4866558 (-) | 1725 | WP_021727765.1 | terminase large subunit | - |
| K8Z38_RS25330 (K8Z38_25295) | - | 4866555..4866989 (-) | 435 | WP_021727764.1 | P27 family phage terminase small subunit | - |
| K8Z38_RS25335 (K8Z38_25300) | - | 4867109..4867474 (-) | 366 | WP_021727763.1 | HNH endonuclease | - |
| K8Z38_RS25340 (K8Z38_25305) | - | 4867471..4867752 (-) | 282 | WP_021727762.1 | hypothetical protein | - |
| K8Z38_RS25345 (K8Z38_25310) | - | 4867881..4868276 (-) | 396 | WP_000460730.1 | DUF1492 domain-containing protein | - |
| K8Z38_RS25350 (K8Z38_25315) | - | 4868456..4868746 (-) | 291 | WP_021727761.1 | hypothetical protein | - |
| K8Z38_RS25355 (K8Z38_25320) | - | 4868806..4869243 (-) | 438 | WP_021727760.1 | hypothetical protein | - |
| K8Z38_RS25360 (K8Z38_25325) | - | 4869316..4869855 (-) | 540 | WP_021727759.1 | ERCC4 domain-containing protein | - |
| K8Z38_RS25365 (K8Z38_25330) | - | 4869852..4870214 (-) | 363 | WP_023901218.1 | YopX family protein | - |
| K8Z38_RS25370 (K8Z38_25335) | - | 4870217..4870645 (-) | 429 | WP_021727757.1 | hypothetical protein | - |
| K8Z38_RS25375 (K8Z38_25340) | - | 4870633..4870872 (-) | 240 | WP_021727756.1 | hypothetical protein | - |
| K8Z38_RS25380 (K8Z38_25345) | - | 4871150..4873504 (-) | 2355 | WP_021727755.1 | phage/plasmid primase, P4 family | - |
| K8Z38_RS25385 (K8Z38_25350) | - | 4873524..4874036 (-) | 513 | WP_021727754.1 | helix-turn-helix domain-containing protein | - |
| K8Z38_RS25390 (K8Z38_25355) | - | 4874109..4874567 (-) | 459 | WP_021727753.1 | DUF669 domain-containing protein | - |
| K8Z38_RS25395 (K8Z38_25360) | - | 4874596..4875267 (-) | 672 | WP_021727752.1 | AAA family ATPase | - |
| K8Z38_RS25400 (K8Z38_25365) | - | 4875273..4875464 (-) | 192 | WP_021727751.1 | hypothetical protein | - |
| K8Z38_RS25405 (K8Z38_25370) | - | 4875466..4875666 (-) | 201 | WP_023901216.1 | hypothetical protein | - |
| K8Z38_RS25410 (K8Z38_25375) | - | 4875629..4875931 (-) | 303 | WP_021727749.1 | hypothetical protein | - |
| K8Z38_RS25415 (K8Z38_25380) | - | 4875931..4876281 (-) | 351 | WP_021727748.1 | hypothetical protein | - |
| K8Z38_RS25420 (K8Z38_25385) | - | 4876278..4876475 (-) | 198 | WP_001262629.1 | hypothetical protein | - |
| K8Z38_RS25425 (K8Z38_25390) | - | 4876494..4876649 (-) | 156 | WP_021727747.1 | hypothetical protein | - |
| K8Z38_RS25430 (K8Z38_25395) | - | 4876710..4877354 (-) | 645 | WP_016097904.1 | sigma-70 family RNA polymerase sigma factor | - |
| K8Z38_RS25435 (K8Z38_25400) | - | 4877379..4877729 (-) | 351 | WP_021727746.1 | hypothetical protein | - |
| K8Z38_RS25440 (K8Z38_25405) | - | 4877748..4877975 (-) | 228 | WP_021727745.1 | hypothetical protein | - |
| K8Z38_RS25445 (K8Z38_25410) | - | 4877976..4878203 (-) | 228 | WP_021727744.1 | hypothetical protein | - |
| K8Z38_RS25450 (K8Z38_25415) | - | 4878204..4878371 (-) | 168 | WP_023901215.1 | hypothetical protein | - |
| K8Z38_RS25455 (K8Z38_25420) | - | 4878368..4878571 (-) | 204 | WP_021727743.1 | hypothetical protein | - |
| K8Z38_RS25460 (K8Z38_25425) | - | 4878598..4878843 (-) | 246 | WP_021727742.1 | helix-turn-helix transcriptional regulator | - |
| K8Z38_RS25465 (K8Z38_25430) | - | 4879008..4879634 (+) | 627 | WP_021727741.1 | LexA family transcriptional regulator | - |
| K8Z38_RS25470 (K8Z38_25435) | - | 4879722..4880765 (+) | 1044 | WP_021727740.1 | tyrosine-type recombinase/integrase | - |
| K8Z38_RS25475 (K8Z38_25440) | sufB | 4880832..4882229 (-) | 1398 | WP_001118827.1 | Fe-S cluster assembly protein SufB | - |
Sequence
Protein
Download Length: 359 a.a. Molecular weight: 38666.84 Da Isoelectric Point: 4.8628
>NTDB_id=604854 K8Z38_RS25235 WP_021728000.1 4847819..4848898(-) (recA) [Bacillus thuringiensis strain GC-91]
MAATENTTKGKEKALEEALKKIVKEFGTGAIMKLGERPNQKVSVVSSGSVGLDNALGVGGYPKGRITEIFGPESSGKTTI
ALHAIAEAQKEGGTAAFIDAEHALDPSYAQKLGVNIDELLMSQPDTGEQALEIAEALVRSGAVDIIVIDSVAALVPKAEI
DGDMGDSHVGLQARLMGQAMRKISGAISKNGVVAIFLNQIREKVGVSFGSPETTPGGRALKFYSTIRLDVRRGEQLKGKE
SDVLGNKTKVKVVKNKVAPPFKNIDFDILYGEGISLEGELIDIGVDLDIVQKSGAWYSYQEERLGQGRDNAKQFLKENEN
ISNSVRNEIYEYYSPKEDSVVVKEGLINENEPITLKESE
MAATENTTKGKEKALEEALKKIVKEFGTGAIMKLGERPNQKVSVVSSGSVGLDNALGVGGYPKGRITEIFGPESSGKTTI
ALHAIAEAQKEGGTAAFIDAEHALDPSYAQKLGVNIDELLMSQPDTGEQALEIAEALVRSGAVDIIVIDSVAALVPKAEI
DGDMGDSHVGLQARLMGQAMRKISGAISKNGVVAIFLNQIREKVGVSFGSPETTPGGRALKFYSTIRLDVRRGEQLKGKE
SDVLGNKTKVKVVKNKVAPPFKNIDFDILYGEGISLEGELIDIGVDLDIVQKSGAWYSYQEERLGQGRDNAKQFLKENEN
ISNSVRNEIYEYYSPKEDSVVVKEGLINENEPITLKESE
Nucleotide
Download Length: 1080 bp
>NTDB_id=604854 K8Z38_RS25235 WP_021728000.1 4847819..4848898(-) (recA) [Bacillus thuringiensis strain GC-91]
ATGGCAGCAACTGAAAATACAACTAAAGGAAAAGAGAAAGCATTAGAAGAGGCTCTGAAGAAAATCGTAAAAGAATTTGG
TACAGGGGCTATTATGAAACTGGGTGAGCGACCTAATCAAAAAGTATCTGTCGTATCAAGTGGTTCTGTTGGATTAGATA
ATGCTTTAGGGGTTGGTGGATATCCAAAAGGACGCATTACTGAAATCTTTGGTCCTGAATCTTCAGGTAAGACAACTATA
GCATTACATGCAATTGCAGAAGCGCAAAAAGAAGGTGGAACAGCGGCATTTATTGATGCAGAGCATGCCCTTGACCCTAG
TTATGCACAGAAATTAGGTGTGAATATTGATGAACTGCTCATGTCACAACCAGATACAGGAGAGCAAGCACTAGAGATTG
CAGAAGCTCTAGTTAGAAGTGGGGCTGTAGATATCATTGTGATAGATTCTGTAGCTGCTTTAGTCCCGAAAGCGGAAATT
GATGGGGACATGGGAGATTCACATGTGGGATTGCAGGCTAGATTGATGGGGCAGGCAATGAGAAAAATATCAGGAGCAAT
ATCCAAAAATGGAGTTGTAGCAATATTTTTAAATCAAATCAGAGAAAAAGTTGGTGTTTCTTTTGGGAGTCCTGAGACAA
CACCAGGTGGTAGGGCGTTAAAATTCTATTCAACAATTCGACTAGATGTACGTAGAGGAGAACAGTTGAAAGGAAAAGAG
AGTGACGTTTTAGGGAATAAAACAAAAGTGAAAGTAGTAAAAAATAAAGTTGCTCCACCATTTAAAAACATTGACTTTGA
CATCTTATACGGAGAAGGAATCTCCTTAGAGGGAGAGCTTATTGATATTGGTGTAGATTTAGATATTGTTCAGAAAAGTG
GGGCATGGTACTCGTATCAAGAAGAACGTCTTGGACAGGGTAGAGACAATGCCAAACAATTTCTGAAAGAGAATGAAAAC
ATAAGTAATTCTGTTCGAAATGAAATTTATGAATACTATTCTCCAAAAGAAGATTCTGTTGTTGTGAAAGAGGGGCTTAT
AAATGAAAATGAGCCCATTACTTTAAAAGAGTCGGAATAA
ATGGCAGCAACTGAAAATACAACTAAAGGAAAAGAGAAAGCATTAGAAGAGGCTCTGAAGAAAATCGTAAAAGAATTTGG
TACAGGGGCTATTATGAAACTGGGTGAGCGACCTAATCAAAAAGTATCTGTCGTATCAAGTGGTTCTGTTGGATTAGATA
ATGCTTTAGGGGTTGGTGGATATCCAAAAGGACGCATTACTGAAATCTTTGGTCCTGAATCTTCAGGTAAGACAACTATA
GCATTACATGCAATTGCAGAAGCGCAAAAAGAAGGTGGAACAGCGGCATTTATTGATGCAGAGCATGCCCTTGACCCTAG
TTATGCACAGAAATTAGGTGTGAATATTGATGAACTGCTCATGTCACAACCAGATACAGGAGAGCAAGCACTAGAGATTG
CAGAAGCTCTAGTTAGAAGTGGGGCTGTAGATATCATTGTGATAGATTCTGTAGCTGCTTTAGTCCCGAAAGCGGAAATT
GATGGGGACATGGGAGATTCACATGTGGGATTGCAGGCTAGATTGATGGGGCAGGCAATGAGAAAAATATCAGGAGCAAT
ATCCAAAAATGGAGTTGTAGCAATATTTTTAAATCAAATCAGAGAAAAAGTTGGTGTTTCTTTTGGGAGTCCTGAGACAA
CACCAGGTGGTAGGGCGTTAAAATTCTATTCAACAATTCGACTAGATGTACGTAGAGGAGAACAGTTGAAAGGAAAAGAG
AGTGACGTTTTAGGGAATAAAACAAAAGTGAAAGTAGTAAAAAATAAAGTTGCTCCACCATTTAAAAACATTGACTTTGA
CATCTTATACGGAGAAGGAATCTCCTTAGAGGGAGAGCTTATTGATATTGGTGTAGATTTAGATATTGTTCAGAAAAGTG
GGGCATGGTACTCGTATCAAGAAGAACGTCTTGGACAGGGTAGAGACAATGCCAAACAATTTCTGAAAGAGAATGAAAAC
ATAAGTAATTCTGTTCGAAATGAAATTTATGAATACTATTCTCCAAAAGAAGATTCTGTTGTTGTGAAAGAGGGGCTTAT
AAATGAAAATGAGCCCATTACTTTAAAAGAGTCGGAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.