Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   NLY35_RS04295 Genome accession   NZ_CP100418
Coordinates   849977..850459 (-) Length   160 a.a.
NCBI ID   WP_012028247.1    Uniprot ID   A0A0H3MUQ1
Organism   Streptococcus suis strain STC104     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 844977..855459
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NLY35_RS04270 (NLY35_04270) pheT 845285..847684 (+) 2400 WP_024417492.1 phenylalanine--tRNA ligase subunit beta -
  NLY35_RS04275 (NLY35_04275) - 847739..848005 (+) 267 WP_002938070.1 DUF2087 domain-containing protein -
  NLY35_RS04280 (NLY35_04280) - 848026..848328 (-) 303 WP_015646754.1 hypothetical protein -
  NLY35_RS04285 (NLY35_04285) - 848521..849264 (+) 744 WP_204101612.1 polyphosphate polymerase domain-containing protein -
  NLY35_RS04290 (NLY35_04290) - 849251..849928 (+) 678 WP_002938079.1 DUF4956 domain-containing protein -
  NLY35_RS04295 (NLY35_04295) mutX 849977..850459 (-) 483 WP_012028247.1 8-oxo-dGTP diphosphatase Machinery gene
  NLY35_RS04300 (NLY35_04300) folE 850626..851189 (+) 564 WP_002938082.1 GTP cyclohydrolase I FolE -
  NLY35_RS04305 (NLY35_04305) folP 851198..852010 (+) 813 WP_024417490.1 dihydropteroate synthase -
  NLY35_RS04310 (NLY35_04310) folB 852003..852365 (+) 363 WP_002938086.1 dihydroneopterin aldolase -
  NLY35_RS04315 (NLY35_04315) folK 852362..852850 (+) 489 WP_009910002.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  NLY35_RS04320 (NLY35_04320) - 852901..854211 (+) 1311 WP_002938090.1 GntP family permease -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18554.91 Da        Isoelectric Point: 4.4960

>NTDB_id=604815 NLY35_RS04295 WP_012028247.1 849977..850459(-) (mutX) [Streptococcus suis strain STC104]
MTKKPVQLATICYIDNGKEFLLLHRNKKENDVHQGKWIGVGGKLEPGETPQACAIREIFEETGLTVTKHALKGVITFPDF
TPNTDWYTYVFKITGFEGSLIDCNEGDLEWVPYDQVLSKPTWEGDRHFQEWLLEDKPFFSACFRYDGDKLLDYSVDFYEE

Nucleotide


Download         Length: 483 bp        

>NTDB_id=604815 NLY35_RS04295 WP_012028247.1 849977..850459(-) (mutX) [Streptococcus suis strain STC104]
ATGACCAAGAAACCCGTCCAACTCGCTACGATTTGCTACATTGATAATGGTAAGGAATTTCTTCTCCTTCATCGAAACAA
GAAAGAAAACGATGTCCATCAAGGAAAATGGATTGGAGTTGGTGGCAAACTAGAACCCGGCGAAACGCCACAGGCTTGTG
CCATTCGAGAAATCTTTGAGGAAACTGGGCTTACTGTAACAAAGCATGCTCTAAAAGGAGTGATAACCTTCCCAGACTTT
ACTCCAAACACAGACTGGTACACCTATGTCTTTAAGATAACTGGTTTTGAAGGAAGTCTTATTGACTGCAATGAAGGTGA
CTTAGAGTGGGTTCCCTATGACCAAGTCTTGTCCAAACCAACTTGGGAGGGCGACCGGCATTTTCAAGAATGGCTATTAG
AGGACAAACCATTTTTTTCCGCTTGCTTCCGCTATGATGGGGACAAACTGCTTGATTACAGTGTTGATTTTTATGAAGAA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(8-132)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3MUQ1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

81.699

95.625

0.781