Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   K9F35_RS17560 Genome accession   NZ_CP083036
Coordinates   3510825..3511421 (-) Length   198 a.a.
NCBI ID   WP_004179217.1    Uniprot ID   A0A085DH59
Organism   Klebsiella pneumoniae strain 4906.28     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3505825..3516421
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K9F35_RS17545 (K9F35_17505) helD 3506033..3508087 (-) 2055 WP_009308304.1 DNA helicase IV -
  K9F35_RS17550 (K9F35_17510) - 3508212..3508658 (+) 447 WP_002898425.1 YccF domain-containing protein -
  K9F35_RS17555 (K9F35_17515) yccS 3508676..3510811 (+) 2136 WP_002898422.1 YccS family putative transporter -
  K9F35_RS17560 (K9F35_17520) sxy/tfoX 3510825..3511421 (-) 597 WP_004179217.1 TfoX/Sxy family DNA transformation protein Regulator
  K9F35_RS17565 (K9F35_17525) sulA 3511770..3512279 (+) 510 WP_002898418.1 SOS-induced cell division inhibitor SulA -
  K9F35_RS17570 (K9F35_17530) ompA 3512632..3513735 (+) 1104 WP_231537608.1 porin OmpA -
  K9F35_RS17575 (K9F35_17535) matP 3513868..3514320 (-) 453 WP_002898404.1 macrodomain Ter protein MatP -
  K9F35_RS17580 (K9F35_17540) - 3514506..3516263 (+) 1758 WP_004147851.1 AAA family ATPase -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22516.11 Da        Isoelectric Point: 10.0350

>NTDB_id=604333 K9F35_RS17560 WP_004179217.1 3510825..3511421(-) (sxy/tfoX) [Klebsiella pneumoniae strain 4906.28]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNCRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=604333 K9F35_RS17560 WP_004179217.1 3510825..3511421(-) (sxy/tfoX) [Klebsiella pneumoniae strain 4906.28]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGGAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTGCCGACGGGCGTCGGGCCGCCTGAAGGATTTACCCAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGTTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A085DH59

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51