Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   K9F23_RS17360 Genome accession   NZ_CP082967
Coordinates   3483771..3484367 (-) Length   198 a.a.
NCBI ID   WP_004179217.1    Uniprot ID   A0A085DH59
Organism   Klebsiella pneumoniae strain BD-41     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3478771..3489367
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K9F23_RS17345 (K9F23_17310) helD 3478979..3481033 (-) 2055 WP_009308304.1 DNA helicase IV -
  K9F23_RS17350 (K9F23_17315) - 3481158..3481604 (+) 447 WP_002898425.1 YccF domain-containing protein -
  K9F23_RS17355 (K9F23_17320) yccS 3481622..3483757 (+) 2136 WP_002898422.1 YccS family putative transporter -
  K9F23_RS17360 (K9F23_17325) sxy/tfoX 3483771..3484367 (-) 597 WP_004179217.1 TfoX/Sxy family DNA transformation protein Regulator
  K9F23_RS17365 (K9F23_17330) sulA 3484716..3485225 (+) 510 WP_002898418.1 SOS-induced cell division inhibitor SulA -
  K9F23_RS17370 (K9F23_17335) ompA 3485578..3486648 (+) 1071 WP_002898408.1 porin OmpA -
  K9F23_RS17375 (K9F23_17340) matP 3486781..3487233 (-) 453 WP_002898404.1 macrodomain Ter protein MatP -
  K9F23_RS17380 (K9F23_17345) - 3487419..3489176 (+) 1758 WP_004147851.1 AAA family ATPase -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22516.11 Da        Isoelectric Point: 10.0350

>NTDB_id=604021 K9F23_RS17360 WP_004179217.1 3483771..3484367(-) (sxy/tfoX) [Klebsiella pneumoniae strain BD-41]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNCRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=604021 K9F23_RS17360 WP_004179217.1 3483771..3484367(-) (sxy/tfoX) [Klebsiella pneumoniae strain BD-41]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGGAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTGCCGACGGGCGTCGGGCCGCCTGAAGGATTTACCCAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGTTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A085DH59

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51