Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | NIK71_RS03680 | Genome accession | NZ_CP100305 |
| Coordinates | 753318..754424 (+) | Length | 368 a.a. |
| NCBI ID | WP_001187342.1 | Uniprot ID | A0ABX6CGL8 |
| Organism | Acinetobacter baumannii strain KBN10P05679 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 748318..759424
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NIK71_RS03645 (NIK71_03645) | grxD | 748663..749004 (-) | 342 | WP_000138830.1 | Grx4 family monothiol glutaredoxin | - |
| NIK71_RS03650 (NIK71_03650) | - | 749232..750440 (+) | 1209 | WP_000129953.1 | aspartate aminotransferase family protein | - |
| NIK71_RS03655 (NIK71_03655) | - | 750491..750922 (-) | 432 | WP_000156920.1 | CBS domain-containing protein | - |
| NIK71_RS03660 (NIK71_03660) | - | 751063..751437 (-) | 375 | WP_001087274.1 | DUF2750 domain-containing protein | - |
| NIK71_RS03665 (NIK71_03665) | - | 751975..752208 (-) | 234 | WP_000616034.1 | hypothetical protein | - |
| NIK71_RS03670 (NIK71_03670) | - | 752424..752783 (+) | 360 | WP_000185571.1 | hypothetical protein | - |
| NIK71_RS03675 (NIK71_03675) | - | 752884..753210 (+) | 327 | WP_000955083.1 | hypothetical protein | - |
| NIK71_RS03680 (NIK71_03680) | pilA | 753318..754424 (+) | 1107 | WP_001187342.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| NIK71_RS03685 (NIK71_03685) | - | 754614..755210 (+) | 597 | WP_000102943.1 | nitroreductase family protein | - |
| NIK71_RS03690 (NIK71_03690) | - | 755436..756107 (+) | 672 | WP_000175350.1 | DUF2057 domain-containing protein | - |
| NIK71_RS03695 (NIK71_03695) | - | 756180..756704 (+) | 525 | WP_000593801.1 | GNAT family N-acetyltransferase | - |
| NIK71_RS03700 (NIK71_03700) | - | 756717..757016 (-) | 300 | WP_085916945.1 | cyd operon YbgE family protein | - |
| NIK71_RS03705 (NIK71_03705) | cydX | 757017..757118 (-) | 102 | WP_000270276.1 | cytochrome bd-I oxidase subunit CydX | - |
| NIK71_RS03710 (NIK71_03710) | cydB | 757132..758277 (-) | 1146 | WP_000575152.1 | cytochrome d ubiquinol oxidase subunit II | - |
Sequence
Protein
Download Length: 368 a.a. Molecular weight: 39919.72 Da Isoelectric Point: 4.9872
>NTDB_id=603904 NIK71_RS03680 WP_001187342.1 753318..754424(+) (pilA) [Acinetobacter baumannii strain KBN10P05679]
MQQQSNMQNKFLIDAEIGDDDVTLPNLPAIDVPIVESPVKQEVKAEEVVEAAPSTEPEQPKSGFFGRMKEGLSKTRRNFT
DGMVNILIGGKEIDDELLEEVEEQLLVADIGVDATKTIITNLTERTARGDLIYSHSLYKALQEELVALLAPRVKPLHIDP
NKSPYVILMVGVNGVGKTTTIGKLAKRLQGEGKKVMLAAGDTFRAAATEQLQIWGERNDIAVVAQGHGADSASVIFDAFE
SARAKGIDVLIADTAGRLHNKSNLMEELKKVKRVMQKIDATAPHEIMLVVDAGTGQNAINQVQEFDQAVGLTGITITKLD
GTAKGGVLFNIASRTHVPIRFIGVGEKIDDLRPFSAKSFVAALFETEK
MQQQSNMQNKFLIDAEIGDDDVTLPNLPAIDVPIVESPVKQEVKAEEVVEAAPSTEPEQPKSGFFGRMKEGLSKTRRNFT
DGMVNILIGGKEIDDELLEEVEEQLLVADIGVDATKTIITNLTERTARGDLIYSHSLYKALQEELVALLAPRVKPLHIDP
NKSPYVILMVGVNGVGKTTTIGKLAKRLQGEGKKVMLAAGDTFRAAATEQLQIWGERNDIAVVAQGHGADSASVIFDAFE
SARAKGIDVLIADTAGRLHNKSNLMEELKKVKRVMQKIDATAPHEIMLVVDAGTGQNAINQVQEFDQAVGLTGITITKLD
GTAKGGVLFNIASRTHVPIRFIGVGEKIDDLRPFSAKSFVAALFETEK
Nucleotide
Download Length: 1107 bp
>NTDB_id=603904 NIK71_RS03680 WP_001187342.1 753318..754424(+) (pilA) [Acinetobacter baumannii strain KBN10P05679]
ATGCAACAACAATCGAATATGCAAAATAAATTCTTGATAGATGCTGAGATCGGGGATGACGATGTCACATTGCCTAATTT
ACCTGCTATCGATGTTCCTATCGTTGAGTCACCTGTTAAGCAAGAAGTAAAAGCTGAAGAAGTTGTCGAGGCTGCACCTT
CTACAGAACCTGAGCAACCAAAATCTGGTTTCTTTGGACGAATGAAAGAAGGCTTGAGCAAAACTCGCCGTAATTTCACC
GATGGGATGGTTAATATCTTAATTGGTGGGAAAGAAATTGATGATGAGTTGCTTGAAGAAGTCGAAGAGCAATTATTAGT
TGCAGATATTGGTGTTGATGCAACAAAAACGATTATTACCAACTTAACTGAACGTACTGCTCGTGGTGATTTGATCTATT
CACATTCACTTTATAAAGCCTTGCAAGAAGAGTTAGTTGCTTTGCTTGCTCCACGTGTGAAGCCTTTGCATATTGACCCT
AATAAATCACCTTATGTGATTTTAATGGTTGGGGTAAATGGTGTTGGAAAAACAACAACAATTGGTAAATTAGCGAAGCG
TTTACAAGGTGAAGGCAAAAAAGTGATGTTGGCGGCAGGTGATACATTCCGTGCTGCTGCTACTGAACAATTGCAAATCT
GGGGTGAGCGTAACGATATTGCTGTAGTTGCTCAAGGTCATGGTGCCGATAGTGCATCAGTTATTTTTGATGCTTTTGAA
AGTGCGCGAGCTAAAGGTATTGATGTACTGATTGCAGATACTGCGGGCCGTTTGCATAACAAAAGTAATTTGATGGAAGA
GCTTAAGAAAGTTAAGCGTGTTATGCAAAAAATTGATGCAACAGCGCCTCATGAAATTATGTTGGTTGTAGATGCGGGTA
CTGGGCAAAATGCAATCAACCAAGTACAAGAATTTGACCAGGCTGTCGGTTTAACAGGTATTACCATTACTAAGTTGGAT
GGTACAGCAAAAGGTGGAGTATTATTTAATATTGCTAGTCGTACTCATGTGCCAATTCGTTTCATTGGTGTGGGTGAAAA
AATTGATGATTTAAGACCATTCTCGGCGAAATCGTTTGTTGCAGCACTATTTGAAACTGAAAAATAA
ATGCAACAACAATCGAATATGCAAAATAAATTCTTGATAGATGCTGAGATCGGGGATGACGATGTCACATTGCCTAATTT
ACCTGCTATCGATGTTCCTATCGTTGAGTCACCTGTTAAGCAAGAAGTAAAAGCTGAAGAAGTTGTCGAGGCTGCACCTT
CTACAGAACCTGAGCAACCAAAATCTGGTTTCTTTGGACGAATGAAAGAAGGCTTGAGCAAAACTCGCCGTAATTTCACC
GATGGGATGGTTAATATCTTAATTGGTGGGAAAGAAATTGATGATGAGTTGCTTGAAGAAGTCGAAGAGCAATTATTAGT
TGCAGATATTGGTGTTGATGCAACAAAAACGATTATTACCAACTTAACTGAACGTACTGCTCGTGGTGATTTGATCTATT
CACATTCACTTTATAAAGCCTTGCAAGAAGAGTTAGTTGCTTTGCTTGCTCCACGTGTGAAGCCTTTGCATATTGACCCT
AATAAATCACCTTATGTGATTTTAATGGTTGGGGTAAATGGTGTTGGAAAAACAACAACAATTGGTAAATTAGCGAAGCG
TTTACAAGGTGAAGGCAAAAAAGTGATGTTGGCGGCAGGTGATACATTCCGTGCTGCTGCTACTGAACAATTGCAAATCT
GGGGTGAGCGTAACGATATTGCTGTAGTTGCTCAAGGTCATGGTGCCGATAGTGCATCAGTTATTTTTGATGCTTTTGAA
AGTGCGCGAGCTAAAGGTATTGATGTACTGATTGCAGATACTGCGGGCCGTTTGCATAACAAAAGTAATTTGATGGAAGA
GCTTAAGAAAGTTAAGCGTGTTATGCAAAAAATTGATGCAACAGCGCCTCATGAAATTATGTTGGTTGTAGATGCGGGTA
CTGGGCAAAATGCAATCAACCAAGTACAAGAATTTGACCAGGCTGTCGGTTTAACAGGTATTACCATTACTAAGTTGGAT
GGTACAGCAAAAGGTGGAGTATTATTTAATATTGCTAGTCGTACTCATGTGCCAATTCGTTTCATTGGTGTGGGTGAAAA
AATTGATGATTTAAGACCATTCTCGGCGAAATCGTTTGTTGCAGCACTATTTGAAACTGAAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
52.038 |
86.685 |
0.451 |