Detailed information NTG0603741

Bioinformatically predicted

Overview

• Name: priA
• Type: Machinery gene
• Locus tag: NI383_RS09335
• Genome accession: NZ_CP099955
• Coordinates: 267390..269594 (-)
• Length: 734 a.a.
• NCBI ID: WP_023624900.1
• Uniprot ID: -
• Organism: Vibrio parahaemolyticus strain Isc4A
• Function: DNA puliing through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 262390..274594

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NI383_RS09315 (NI383_09265)	hslU	263257..264588 (-)	1332	WP_005489452.1	HslU--HslV peptidase ATPase subunit	-
NI383_RS09320 (NI383_09270)	hslV	264612..265163 (-)	552	WP_005489705.1	ATP-dependent protease subunit HslV	-
NI383_RS09325 (NI383_09275)	ftsN	265328..265873 (-)	546	WP_005489623.1	cell division protein FtsN	-
NI383_RS09330 (NI383_09280)	cytR	266050..267057 (-)	1008	WP_005481416.1	DNA-binding transcriptional regulator CytR	Regulator
NI383_RS09335 (NI383_09285)	priA	267390..269594 (-)	2205	WP_023624900.1	primosomal protein N'	Machinery gene
NI383_RS09340 (NI383_09290)	rpmE	269889..270110 (+)	222	WP_005457203.1	50S ribosomal protein L31	-
NI383_RS09345 (NI383_09295)	rpsJ	270568..270879 (+)	312	WP_004410492.1	30S ribosomal protein S10	-
NI383_RS09350 (NI383_09300)	rplC	270894..271523 (+)	630	WP_005456132.1	50S ribosomal protein L3	-
NI383_RS09355 (NI383_09305)	rplD	271541..272143 (+)	603	WP_005379556.1	50S ribosomal protein L4	-
NI383_RS09360 (NI383_09310)	rplW	272140..272442 (+)	303	WP_004398471.1	50S ribosomal protein L23	-
NI383_RS09365 (NI383_09315)	rplB	272458..273282 (+)	825	WP_005489461.1	50S ribosomal protein L2	-
NI383_RS09370 (NI383_09320)	rpsS	273304..273582 (+)	279	WP_004394525.1	30S ribosomal protein S19	-
NI383_RS09375 (NI383_09325)	rplV	273593..273925 (+)	333	WP_005383164.1	50S ribosomal protein L22	-

Sequence

Protein

• Length: 734 a.a.
• Molecular weight: 82315.84 Da
• Isoelectric Point: 8.4608

>NTDB_id=603741 NI383_RS09335 WP_023624900.1 267390..269594(-) (priA) [Vibrio parahaemolyticus strain Isc4A]
MRPSIARVALPVPLDKQFDYAIPGYLFPIIGGRVSVPFGRQTLVGIVTAMVNHSDFPQDQLKPIKAVLDSQPVWSEKLYS
LLTWCSQFYQYPLGDTLHNAMPAALRKGKPADFATLQEWQITESGKDKLMQGLDRRAVKQQKVLQMLVNGALPHQEFVDQ
EIASTVLKSLEEKGWIERIEKKPVITQWGQHVECDVEKPKLNHEQALAIASVNSQTGFACYLLEGVTGSGKTEVYLNLIK
PVLEKGKQALVLVPEIGLTPQTINRFKRRFNVPVDVIHSGLNETERLNAWLSARDKAAGIIIGTRSALLAPFADLGIIIV
DEEHDTSYKQQDSLRYHARDVAVMRAHKEQVPIVLGSATPALETLHNALSGKYHHLTLTQRAGSAVPTTNKVLDVKGQYL
ESGLSAPLIAEMRKHLKVGNQVMLFLNRRGFSPALMCHECGWIAECKRCDAYYTFHQYSNEIRCHHCGSQQPVIHQCQGC
GSTQLVTVGVGTEQLEQQLAQLFPEYKAIRIDRDSTRRKGSLEDALDSIRKGEYQILIGTQMLAKGHHFPNVTLVALLDV
DGSLYSSDFRASERLAQLFIQVAGRAGRASKPGEVVLQTHHPEHSLLQALLEKDYRHFAMTALEERKLAQLPPYSFLTLF
KAEANQSEIVEDFLRQVRFTLESHPLFDDTCMVLGPTPSPLAKRAGKYRWQLLLQTQHRSLMQKLLTSAKPAIELLPNAK
KVRWNLDIEPQDLS

Nucleotide

• Length: 2205 bp

>NTDB_id=603741 NI383_RS09335 WP_023624900.1 267390..269594(-) (priA) [Vibrio parahaemolyticus strain Isc4A]
ATGCGTCCATCCATTGCTAGAGTGGCACTGCCCGTACCTCTCGACAAACAATTTGACTATGCCATCCCGGGATACCTGTT
TCCTATCATTGGCGGGCGCGTATCCGTACCTTTTGGACGTCAAACGTTAGTTGGCATCGTCACCGCGATGGTTAATCACT
CGGACTTTCCCCAAGATCAACTCAAGCCAATCAAAGCAGTTCTTGATTCTCAGCCGGTATGGTCTGAAAAGCTTTATTCG
TTGCTGACTTGGTGCAGCCAGTTCTACCAATACCCACTTGGAGATACGCTACACAATGCGATGCCGGCAGCTCTGCGTAA
AGGAAAGCCTGCAGATTTTGCGACGCTACAAGAGTGGCAAATTACCGAATCCGGTAAAGACAAGCTGATGCAAGGGCTTG
ATCGTCGAGCGGTCAAACAACAGAAGGTCTTGCAAATGTTGGTTAACGGCGCTTTGCCTCACCAGGAATTTGTCGACCAA
GAGATAGCCTCAACAGTACTAAAGTCTTTAGAAGAGAAAGGCTGGATTGAACGTATCGAGAAGAAGCCTGTAATCACCCA
GTGGGGACAGCACGTTGAATGCGACGTCGAGAAGCCAAAGCTCAACCACGAACAAGCGCTGGCTATTGCGAGTGTAAATA
GCCAAACAGGTTTTGCTTGCTATTTATTAGAGGGTGTCACGGGCTCAGGTAAGACAGAAGTATACCTCAACCTGATCAAA
CCGGTCTTAGAGAAAGGTAAACAAGCTTTGGTTTTAGTACCAGAGATTGGCTTAACACCGCAAACCATCAACCGCTTTAA
ACGCCGTTTTAATGTGCCTGTTGACGTTATCCACTCCGGATTAAACGAGACGGAGCGTCTGAATGCGTGGCTTTCTGCAC
GCGACAAAGCGGCCGGAATCATTATCGGCACACGCTCTGCCCTACTCGCGCCTTTTGCTGATCTCGGGATTATCATTGTG
GACGAGGAACATGACACCTCTTACAAACAGCAAGATAGCTTGCGTTATCATGCACGCGATGTTGCTGTAATGCGCGCTCA
TAAAGAACAAGTTCCGATTGTTCTGGGCTCAGCCACACCTGCACTGGAGACATTGCACAATGCCTTGTCAGGCAAGTATC
ACCATTTAACCCTGACCCAACGCGCAGGCTCTGCGGTTCCTACTACTAATAAAGTTCTCGACGTCAAAGGTCAGTATTTA
GAAAGTGGTTTATCTGCCCCATTGATTGCGGAAATGCGCAAACACCTTAAAGTAGGCAATCAGGTGATGCTGTTTCTTAA
CCGTCGTGGTTTCTCCCCTGCTCTCATGTGCCATGAATGTGGTTGGATTGCCGAATGCAAACGTTGTGATGCTTATTACA
CCTTCCACCAATACAGCAATGAGATTCGCTGCCACCATTGTGGCTCGCAGCAACCAGTGATTCATCAGTGTCAGGGCTGT
GGTTCAACTCAACTGGTTACCGTTGGTGTCGGTACCGAACAGTTGGAACAACAATTGGCACAACTGTTCCCCGAATACAA
AGCCATCCGTATCGACAGAGATAGCACGCGCCGCAAAGGCAGTTTAGAAGATGCGCTGGACTCCATCCGCAAGGGTGAAT
ATCAAATTTTGATAGGCACTCAAATGTTGGCTAAGGGACACCATTTCCCCAATGTAACGCTCGTCGCCTTGCTAGATGTT
GATGGCTCTCTATATAGTAGCGACTTTCGCGCCTCCGAAAGATTAGCTCAGCTATTCATTCAAGTCGCAGGGCGAGCCGG
ACGTGCAAGTAAGCCGGGGGAAGTGGTTTTACAGACTCACCATCCTGAACACAGTTTGTTGCAAGCCTTATTGGAAAAGG
ACTACCGACACTTCGCTATGACGGCATTAGAGGAACGTAAACTGGCGCAGTTGCCACCTTACAGTTTCCTGACTCTATTT
AAAGCCGAAGCGAATCAGAGCGAGATCGTAGAAGATTTTCTGCGCCAAGTTCGCTTTACCTTAGAATCGCACCCTTTGTT
TGACGACACCTGCATGGTGCTTGGTCCAACACCATCGCCTCTCGCCAAACGCGCAGGCAAATACCGTTGGCAGCTGTTAC
TCCAAACCCAGCACCGCTCATTAATGCAAAAGTTATTAACCAGTGCCAAACCTGCTATTGAGTTGTTGCCTAATGCCAAA
AAAGTTCGCTGGAATTTAGACATAGAACCACAAGATCTCAGCTAG

Domains

Predicted by InterProScan.

• Primosomal protein N C-terminal domain (PriA_C) (633-730)

• 3DNA-binding domain (3BD) (PriA_3primeBD) (7-102)

• PriA DNA helicase Cys-rich region (CRR) domain (Zn_ribbon_PriA) (446-472)

• Helicase conserved C-terminal domain (Helicase_C) (500-589)

• DEAD/DEAH box helicase (DEAD) (220-365)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
priA	Acinetobacter baumannii D1279779	43.649	100	0.44
priA	Bacillus subtilis subsp. subtilis str. 168	34.005	100	0.368