Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   K8L98_RS05805 Genome accession   NZ_CP082944
Coordinates   1178694..1179644 (+) Length   316 a.a.
NCBI ID   WP_223440366.1    Uniprot ID   -
Organism   Metabacillus dongyingensis strain BY2G20     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1173694..1184644
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K8L98_RS05780 (K8L98_05775) argF 1175104..1176054 (+) 951 WP_223440356.1 ornithine carbamoyltransferase -
  K8L98_RS05785 (K8L98_05780) - 1176260..1176439 (+) 180 WP_223440358.1 YjzC family protein -
  K8L98_RS05790 (K8L98_05785) - 1176509..1176694 (-) 186 WP_223440360.1 YjzD family protein -
  K8L98_RS05795 (K8L98_05790) - 1176898..1177629 (+) 732 WP_223440362.1 hypothetical protein -
  K8L98_RS05800 (K8L98_05795) - 1177722..1178573 (+) 852 WP_223440365.1 NAD-dependent epimerase/dehydratase family protein -
  K8L98_RS05805 (K8L98_05800) med 1178694..1179644 (+) 951 WP_223440366.1 BMP family ABC transporter substrate-binding protein Regulator
  K8L98_RS05810 (K8L98_05805) comZ 1179660..1179845 (+) 186 WP_223440367.1 ComZ family protein Regulator
  K8L98_RS05815 (K8L98_05810) rsgA 1179919..1180926 (-) 1008 WP_223440368.1 ribosome small subunit-dependent GTPase A -
  K8L98_RS05820 (K8L98_05815) - 1181159..1181416 (-) 258 WP_223440369.1 hypothetical protein -
  K8L98_RS05825 (K8L98_05820) - 1181583..1182515 (+) 933 WP_223440370.1 beta-ketoacyl-ACP synthase III -
  K8L98_RS05830 (K8L98_05825) fabF 1182553..1183794 (+) 1242 WP_223440372.1 beta-ketoacyl-ACP synthase II -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 35744.07 Da        Isoelectric Point: 4.1812

>NTDB_id=603734 K8L98_RS05805 WP_223440366.1 1178694..1179644(+) (med) [Metabacillus dongyingensis strain BY2G20]
MLKKSILFAICLFFLTGCGQPRQNELEKVGLLVPDTISDQVWGTKGYKGLLKIQSRYGIEVFYKEGMNNQEVVREAVKEF
SGKGVNLIFGHGSEYETFFAELNEEYDDIHFVFFNGEAKGDNMTSLNFDSNAMGFFGGMIAGEMTKTNKVGILAAYEWQP
EIDGFYEGANYQNPDVQVEIQYVQSWDDVKSALNHTDEMLAEGIDVVYPAGDGYNVPVIERIKEKGLYAIGFVSDQSDLG
EATVLTSTIQHVDLLYELVAEKYLNGELESGNLYFDFQDDVIELGKYSPNVDKSFQNKIQEHIEIYRQTDKLPNQF

Nucleotide


Download         Length: 951 bp        

>NTDB_id=603734 K8L98_RS05805 WP_223440366.1 1178694..1179644(+) (med) [Metabacillus dongyingensis strain BY2G20]
ATGCTGAAGAAAAGTATTCTTTTTGCCATATGCCTTTTTTTTCTGACAGGATGCGGACAACCAAGGCAGAATGAACTTGA
GAAAGTGGGCTTGCTTGTCCCGGATACAATCAGCGATCAAGTATGGGGCACGAAGGGATACAAAGGATTATTAAAAATAC
AATCACGTTACGGTATTGAAGTTTTTTATAAAGAAGGGATGAATAACCAAGAAGTAGTTAGAGAAGCGGTAAAAGAGTTT
TCGGGAAAAGGCGTCAATCTCATTTTCGGTCATGGCAGTGAATATGAAACTTTTTTTGCAGAATTGAATGAAGAATATGA
TGATATTCATTTTGTCTTTTTCAATGGAGAGGCAAAGGGAGATAATATGACAAGCCTTAATTTTGACTCAAATGCTATGG
GTTTTTTCGGGGGGATGATTGCCGGTGAAATGACAAAGACAAATAAAGTCGGTATACTGGCAGCTTATGAATGGCAGCCT
GAAATTGATGGTTTTTATGAGGGTGCGAACTATCAGAATCCTGATGTTCAGGTTGAAATCCAGTATGTGCAAAGCTGGGA
TGATGTAAAAAGCGCCCTTAATCATACAGATGAAATGCTTGCAGAAGGCATAGATGTTGTATATCCTGCAGGCGATGGGT
ATAATGTACCTGTCATTGAGCGGATAAAAGAGAAAGGTTTGTATGCAATTGGTTTTGTTTCCGACCAGTCAGATCTTGGC
GAAGCAACTGTCCTTACAAGTACGATCCAGCATGTAGACCTTTTATATGAGCTTGTTGCTGAAAAATATTTGAATGGTGA
GCTTGAAAGCGGAAATTTGTATTTTGATTTTCAGGATGATGTCATTGAACTCGGCAAGTACAGTCCAAATGTGGACAAGT
CCTTTCAAAATAAAATCCAAGAGCATATAGAAATATACAGGCAGACAGATAAGCTGCCTAATCAATTTTAA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-313)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

53.503

99.367

0.532