Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   K8L98_RS03390 Genome accession   NZ_CP082944
Coordinates   660134..660946 (+) Length   270 a.a.
NCBI ID   WP_223439717.1    Uniprot ID   -
Organism   Metabacillus dongyingensis strain BY2G20     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 655134..665946
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K8L98_RS03365 (K8L98_03370) - 656558..656740 (-) 183 WP_223439710.1 YfhD family protein -
  K8L98_RS03370 (K8L98_03375) - 656824..656952 (-) 129 WP_083328406.1 YfhE family protein -
  K8L98_RS03375 (K8L98_03380) - 657053..657610 (-) 558 WP_223439712.1 GNAT family N-acetyltransferase -
  K8L98_RS03380 (K8L98_03385) - 657919..659046 (-) 1128 WP_223439713.1 amidohydrolase -
  K8L98_RS03385 (K8L98_03390) - 659070..659972 (-) 903 WP_223439715.1 TIGR01777 family oxidoreductase -
  K8L98_RS03390 (K8L98_03395) recX 660134..660946 (+) 813 WP_223439717.1 recombination regulator RecX Regulator
  K8L98_RS03395 (K8L98_03400) - 660951..661622 (-) 672 WP_223439719.1 SDR family NAD(P)-dependent oxidoreductase -
  K8L98_RS03400 (K8L98_03405) - 661692..662030 (+) 339 WP_223439721.1 YfhH family protein -
  K8L98_RS03405 (K8L98_03410) - 662069..662227 (-) 159 WP_223439723.1 YpzG family protein -
  K8L98_RS03410 (K8L98_03415) - 662258..662422 (-) 165 WP_223439725.1 small, acid-soluble spore protein K -
  K8L98_RS03415 (K8L98_03420) - 662535..662804 (+) 270 WP_223439727.1 YfhJ family protein -
  K8L98_RS03420 (K8L98_03425) - 664168..665148 (-) 981 WP_223439729.1 metal-dependent hydrolase -

Sequence

Protein


Download         Length: 270 a.a.        Molecular weight: 31412.11 Da        Isoelectric Point: 6.8969

>NTDB_id=603729 K8L98_RS03390 WP_223439717.1 660134..660946(+) (recX) [Metabacillus dongyingensis strain BY2G20]
MPIITKITAQKSSEERFNIFLNEGNGEKFAFSVDQNVLLKFGLKKGLELDEMEILEIQYGDSVKKAFNKAIEFLGFRMRS
EKEVADMLLKKEYAEAVVSEVMHQLRHYKYVNDEEFADAYIRTHWKTGGKGPGVMKQELSLKGISKDIAEKALLQYSKED
QVEQAMVHAEKVVRKESKISTVQIKQKVEQTLMRKGFSYDVISIVKEELMYENNDEEEWNSLVLQAEKLKRKYAKGAAQS
QYKMKMKQALYRKGFSIEIIDRYLSEEEQD

Nucleotide


Download         Length: 813 bp        

>NTDB_id=603729 K8L98_RS03390 WP_223439717.1 660134..660946(+) (recX) [Metabacillus dongyingensis strain BY2G20]
ATGCCAATAATAACGAAAATTACGGCTCAAAAAAGCAGTGAAGAGCGTTTCAATATCTTTTTGAATGAGGGAAACGGCGA
AAAATTCGCATTCAGTGTCGATCAGAATGTCCTTTTAAAATTCGGTCTTAAAAAAGGTCTTGAACTGGACGAGATGGAAA
TCCTGGAAATACAATATGGAGATTCCGTGAAAAAAGCGTTCAATAAAGCCATTGAATTTTTAGGATTCCGAATGCGCTCC
GAAAAAGAAGTTGCGGACATGCTTCTGAAAAAAGAATATGCAGAAGCCGTTGTTTCTGAAGTGATGCACCAGCTGCGCCA
CTATAAGTATGTAAACGATGAAGAGTTTGCAGATGCTTATATCCGCACGCACTGGAAAACCGGCGGAAAAGGGCCCGGTG
TGATGAAGCAGGAGCTTTCATTAAAAGGAATCAGCAAGGACATTGCCGAAAAAGCTCTTTTGCAGTATTCAAAAGAAGAT
CAAGTGGAACAAGCGATGGTCCACGCCGAAAAGGTCGTTCGGAAAGAATCGAAGATCTCCACTGTACAGATTAAGCAAAA
AGTGGAACAGACACTTATGAGAAAAGGCTTCAGCTATGATGTCATTTCTATTGTAAAAGAAGAATTAATGTATGAAAATA
ATGATGAAGAAGAGTGGAATTCCCTTGTTCTTCAGGCAGAAAAACTGAAAAGGAAGTATGCCAAAGGAGCAGCACAGTCA
CAATATAAAATGAAAATGAAGCAGGCTTTATACAGAAAGGGTTTCTCAATTGAAATCATCGACCGTTATTTAAGCGAAGA
AGAGCAGGATTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(88-207)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

53.532

99.63

0.533