Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   K8M01_RS10320 Genome accession   NZ_CP082936
Coordinates   2091591..2092187 (-) Length   198 a.a.
NCBI ID   WP_004150836.1    Uniprot ID   A0A0H3GL50
Organism   Klebsiella pneumoniae strain NDM-71     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 2086591..2097187
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K8M01_RS10305 (K8M01_10305) helD 2086799..2088853 (-) 2055 WP_004176653.1 DNA helicase IV -
  K8M01_RS10310 (K8M01_10310) - 2088978..2089424 (+) 447 WP_002898425.1 YccF domain-containing protein -
  K8M01_RS10315 (K8M01_10315) yccS 2089442..2091577 (+) 2136 WP_002898422.1 YccS family putative transporter -
  K8M01_RS10320 (K8M01_10320) sxy/tfoX 2091591..2092187 (-) 597 WP_004150836.1 TfoX/Sxy family DNA transformation protein Regulator
  K8M01_RS10325 (K8M01_10325) sulA 2092536..2093045 (+) 510 WP_002898418.1 SOS-induced cell division inhibitor SulA -
  K8M01_RS10330 (K8M01_10330) ompA 2093398..2094468 (+) 1071 WP_002898408.1 porin OmpA -
  K8M01_RS10335 (K8M01_10335) matP 2094599..2095051 (-) 453 WP_002898404.1 macrodomain Ter protein MatP -
  K8M01_RS10340 (K8M01_10340) - 2095237..2096994 (+) 1758 WP_004147851.1 Lon protease family protein -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22576.15 Da        Isoelectric Point: 10.1298

>NTDB_id=603703 K8M01_RS10320 WP_004150836.1 2091591..2092187(-) (sxy/tfoX) [Klebsiella pneumoniae strain NDM-71]
MRKLVCPRLPQFQACVSPLGQLHTRPLFGGYSLAIDDTVFAMVAEGNIYLKACEQSAAYRVEHRNPLLTLRRHGRIVPLK
YYQIDDTLWRDEQQLFRLSLLSWQSAQREKNYRRASGRLKDLPNISFHMELQLIHAGIPDVRTLREVGAQEAWLRLRVNN
ASLSLSVLLALEGAIAGVHAAALPTPRRQELLEWAATR

Nucleotide


Download         Length: 597 bp        

>NTDB_id=603703 K8M01_RS10320 WP_004150836.1 2091591..2092187(-) (sxy/tfoX) [Klebsiella pneumoniae strain NDM-71]
ATGAGAAAACTAGTTTGTCCGCGGCTCCCGCAATTTCAGGCCTGCGTCTCACCGCTGGGTCAACTGCATACTCGTCCGCT
CTTTGGCGGCTACAGCCTGGCTATTGATGATACGGTGTTTGCGATGGTGGCCGAGGGGAACATTTATCTGAAGGCCTGCG
AGCAGAGCGCTGCTTATCGGGTGGAACATCGTAATCCTCTGTTAACGCTGCGCCGACACGGCCGCATAGTGCCGCTGAAG
TATTATCAAATTGACGACACTTTATGGCGCGATGAGCAGCAGCTTTTTCGGCTATCGCTACTGTCGTGGCAGAGTGCGCA
GCGCGAAAAGAACTACCGACGGGCGTCGGGCCGCCTGAAGGATTTACCTAATATCAGCTTTCATATGGAATTGCAGCTGA
TTCACGCGGGCATACCGGACGTTAGGACGTTGCGGGAAGTTGGTGCGCAGGAGGCATGGCTGAGGCTACGCGTAAATAAT
GCTTCTTTATCGCTGAGCGTATTGCTGGCGCTGGAGGGGGCGATTGCCGGGGTACATGCCGCCGCGCTCCCGACGCCACG
GCGTCAGGAGCTTCTCGAATGGGCGGCTACCCGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(117-194)

TfoX N-terminal domain (TfoX_N)

(16-105)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3GL50

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

51.269

99.495

0.51