Detailed information    

insolico Bioinformatically predicted

Overview

Name   comQ   Type   Regulator
Locus tag   K8U58_RS17200 Genome accession   NZ_CP082924
Coordinates   3255600..3256499 (-) Length   299 a.a.
NCBI ID   WP_003243039.1    Uniprot ID   G9LQ79
Organism   Bacillus subtilis strain FJAT-4     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 3250600..3261499
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K8U58_RS17165 (K8U58_17100) mrpE 3250840..3251316 (+) 477 WP_003244015.1 Na+/H+ antiporter subunit E -
  K8U58_RS17170 (K8U58_17105) mrpF 3251316..3251600 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  K8U58_RS17175 (K8U58_17110) mnhG 3251584..3251958 (+) 375 WP_003244302.1 monovalent cation/H(+) antiporter subunit G -
  K8U58_RS17180 (K8U58_17115) yuxO 3251997..3252377 (-) 381 WP_003228810.1 hotdog fold thioesterase -
  K8U58_RS17185 (K8U58_17120) comA 3252396..3253040 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  K8U58_RS17190 (K8U58_17125) comP 3253121..3255430 (-) 2310 WP_003242894.1 two-component system sensor histidine kinase ComP Regulator
  K8U58_RS17195 (K8U58_17130) comX 3255445..3255612 (-) 168 WP_003242801.1 competence pheromone ComX Regulator
  K8U58_RS17200 (K8U58_17135) comQ 3255600..3256499 (-) 900 WP_003243039.1 ComX modifying isoprenyl transferase ComQ Regulator
  K8U58_RS17205 (K8U58_17140) degQ 3256684..3256824 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  K8U58_RS17210 (K8U58_17145) - 3257046..3257171 (+) 126 WP_003228793.1 hypothetical protein -
  K8U58_RS17215 (K8U58_17150) - 3257285..3257653 (+) 369 WP_003243784.1 hypothetical protein -
  K8U58_RS17220 (K8U58_17155) pdeH 3257629..3258858 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -
  K8U58_RS17225 (K8U58_17160) pncB 3258995..3260467 (-) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  K8U58_RS17230 (K8U58_17165) pncA 3260483..3261034 (-) 552 WP_003243099.1 cysteine hydrolase family protein -

Sequence

Protein


Download         Length: 299 a.a.        Molecular weight: 34218.11 Da        Isoelectric Point: 4.8304

>NTDB_id=603610 K8U58_RS17200 WP_003243039.1 3255600..3256499(-) (comQ) [Bacillus subtilis strain FJAT-4]
MKEIVEQNIFNEDLSQLLYSFIDSKETFSFAESTILHYVVFGGENLDVATRLGAGIEILILSSDIMDDLEDEDNHHALWM
KINRSESLNAALSLYTVGLTSIYSLNNNPLIFKYVLKYVNEAMQGQHDDITNKSKTEDESLEVIRLKCGSLIALANVAGV
LLATGEYNETVERYSYYKGIIAQISGDYYVLLSGNRSDIEKNKHTLIYLYLKRLFNDASEDLLYLISHKDLYYKSLLDKE
KFQEKLIKAGVTQYISVLLEIYKQKCISAIEQLNLDKEKKELIKECLLSYTKGDTRCKT

Nucleotide


Download         Length: 900 bp        

>NTDB_id=603610 K8U58_RS17200 WP_003243039.1 3255600..3256499(-) (comQ) [Bacillus subtilis strain FJAT-4]
ATGAAGGAGATTGTGGAGCAAAACATATTTAACGAGGATTTGTCACAACTTCTTTACTCATTTATTGATTCTAAAGAAAC
ATTCTCCTTTGCTGAATCCACAATCTTACATTATGTTGTTTTTGGAGGGGAGAATTTAGATGTTGCAACAAGGCTTGGCG
CGGGAATAGAAATTCTTATTCTTTCATCAGATATTATGGATGATCTTGAAGATGAAGATAATCACCATGCATTATGGATG
AAAATTAATCGCTCGGAGTCGTTAAATGCAGCACTTTCCTTGTATACAGTAGGATTAACGAGTATTTATTCATTAAATAA
CAATCCTCTAATTTTTAAATATGTTTTAAAATACGTAAACGAGGCCATGCAAGGTCAACATGACGATATCACTAATAAAT
CTAAAACAGAAGATGAAAGTTTAGAAGTAATTAGATTAAAATGTGGAAGTCTGATTGCACTAGCAAATGTAGCAGGTGTT
TTATTGGCTACAGGAGAATATAATGAAACAGTTGAAAGATATTCCTACTATAAAGGGATTATAGCTCAAATTTCTGGAGA
TTATTATGTTCTTTTATCCGGAAATCGCAGTGATATTGAAAAAAACAAACATACACTGATTTACTTATATCTTAAGCGCC
TTTTTAATGATGCTTCGGAAGATTTATTATACTTAATTTCACATAAAGACTTATATTATAAATCGTTACTTGATAAAGAG
AAATTCCAAGAAAAATTAATTAAAGCGGGAGTTACTCAATACATTTCGGTATTATTGGAAATATATAAACAGAAATGTAT
TTCTGCTATAGAACAATTAAATTTAGATAAAGAAAAAAAAGAGCTAATAAAGGAATGCTTATTAAGTTATACAAAGGGGG
ATACAAGATGCAAGACCTAA

Domains

Predicted by InterproScan.

Polyprenyl synthetase (polyprenyl_synt)

(44-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G9LQ79

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

100

100

1