Detailed information NTG0060329

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: HK74_RS01440
• Genome accession: NC_021834
• Coordinates: 266090..267049 (+)
• Length: 319 a.a.
• NCBI ID: WP_020836829.1
• Uniprot ID: -
• Organism: Campylobacter jejuni 32488
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 261090..272049

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HK74_RS01415 (M635_01405)	neuB	261588..262628 (+)	1041	WP_002935332.1	N-acetylneuraminate synthase	-
HK74_RS01420 (M635_01410)	neuC	262625..263743 (+)	1119	WP_020836825.1	UDP-N-acetylglucosamine 2-epimerase	-
HK74_RS01425 (M635_01415)	-	263740..264405 (+)	666	WP_020836826.1	acylneuraminate cytidylyltransferase family protein	-
HK74_RS01430 (M635_01420)	-	264529..265227 (+)	699	WP_020836827.1	CatB-related O-acetyltransferase	-
HK74_RS01435 (M635_01425)	-	265219..266031 (-)	813	WP_020836828.1	glycosyltransferase family 2 protein	-
HK74_RS01440 (M635_01430)	waaF	266090..267049 (+)	960	WP_020836829.1	lipopolysaccharide heptosyltransferase II	Regulator
HK74_RS01445 (M635_01435)	gmhA	267030..267590 (-)	561	WP_020836830.1	D-sedoheptulose 7-phosphate isomerase	-
HK74_RS01450 (M635_01440)	rfaE1	267587..268972 (-)	1386	WP_020836831.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
HK74_RS01455 (M635_01445)	rfaD	268965..269918 (-)	954	WP_002886910.1	ADP-glyceromanno-heptose 6-epimerase	-
HK74_RS01460 (M635_01450)	gmhB	269919..270480 (-)	562	Protein_281	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
HK74_RS01465 (M635_01455)	-	270561..270863 (+)	303	WP_002852762.1	cytochrome c	-
HK74_RS01470 (M635_01460)	ccoS	270867..271091 (-)	225	WP_020836832.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36656.15 Da
• Isoelectric Point: 10.2870

>NTDB_id=60329 HK74_RS01440 WP_020836829.1 266090..267049(+) (waaF) [Campylobacter jejuni 32488]
MKIFIHLPTWLGDAVMASPALYTIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHSKDLKLPFKLKLQDPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKSEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHISAVYKVKTVAIFGPTKFTQTSPWQNENAILVHLDLACMPCMQKTCPLKHHKCMKDLKPQRVIEEARNLLKNSHR

Nucleotide

• Length: 960 bp

>NTDB_id=60329 HK74_RS01440 WP_020836829.1 266090..267049(+) (waaF) [Campylobacter jejuni 32488]
ATGAAAATTTTTATACACCTTCCCACTTGGCTAGGCGATGCGGTGATGGCTTCACCTGCTTTATACACCATAAAAGAACA
TTTTAAAAATGCTCAGTTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAAATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTGCATATCCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTCTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAACTTCAAGACCCTCTTGTCTTAAAAAATGGTAAAAAAATTCTAGGACTCAATCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTGGCTTTAAATTTCAGCCAAAGTCATGAAATTTT
AATCTTTGGCGCAGGAAAATCCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAACAAAACCACCATCAAAACCCTTTGTCAAAATATCGCTTTTTGCGATCTTTTCATCACAAATGACAGT
GGTCCTATGCACATAAGTGCGGTTTATAAGGTAAAAACCGTAGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATGAAAACGCAATATTAGTGCATTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAACCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATCTAAAGCCTCAAAGGGTTATAGAAGAGGCTAGAAATTTACTTAAAAACTCTCATCGATGA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (96-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	94.34	99.687	0.94