Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   K8P00_RS08280 Genome accession   NZ_CP082861
Coordinates   1636460..1636921 (+) Length   153 a.a.
NCBI ID   WP_003822196.1    Uniprot ID   A0A1A9RTG6
Organism   Eikenella corrodens strain FDAARGOS_1474     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context

Location: 1631460..1641921
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K8P00_RS08250 (K8P00_08205) - 1631461..1632009 (-) 549 WP_035579830.1 DUF924 family protein -
  K8P00_RS08255 (K8P00_08210) - 1632132..1632947 (-) 816 WP_003822189.1 MJ0042-type zinc finger domain-containing protein -
  K8P00_RS08260 (K8P00_08215) prmA 1633198..1634091 (-) 894 WP_003822192.1 50S ribosomal protein L11 methyltransferase -
  K8P00_RS08265 (K8P00_08220) hscB 1634292..1634792 (+) 501 WP_003822193.1 Fe-S protein assembly co-chaperone HscB -
  K8P00_RS08270 (K8P00_08225) - 1634894..1635676 (+) 783 WP_003822194.1 BPSS1780 family membrane protein -
  K8P00_RS08275 (K8P00_08230) - 1635775..1636473 (+) 699 WP_003822195.1 phosphoglycolate phosphatase -
  K8P00_RS08280 (K8P00_08235) recX 1636460..1636921 (+) 462 WP_003822196.1 recombination regulator RecX Regulator
  K8P00_RS08285 (K8P00_08240) gcvP 1637290..1640142 (+) 2853 WP_003822199.1 aminomethyl-transferring glycine dehydrogenase -
  K8P00_RS08290 (K8P00_08245) - 1640430..1640717 (+) 288 WP_088383832.1 putative quinol monooxygenase -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17743.84 Da        Isoelectric Point: 7.2779

>NTDB_id=603212 K8P00_RS08280 WP_003822196.1 1636460..1636921(+) (recX) [Eikenella corrodens strain FDAARGOS_1474]
MTAVKSLRSRALDLLSRREMSQAELRRKLAPYAEDPAEIDALLQEFADRNWQSDRRYAESYVYSKGSRYGRLRLAQGLQQ
QKLDSELIEAALPGHDSERATACAVLRKKFKQPPADFAAQQRAARFLAYRGFDHDTIRHALDKAWQDEEEWDE

Nucleotide


Download         Length: 462 bp        

>NTDB_id=603212 K8P00_RS08280 WP_003822196.1 1636460..1636921(+) (recX) [Eikenella corrodens strain FDAARGOS_1474]
ATGACCGCCGTTAAATCCCTGCGCAGCCGCGCCTTAGATTTGTTGTCGCGTCGGGAAATGTCGCAGGCCGAACTGCGGCG
CAAACTCGCGCCCTACGCCGAAGACCCCGCCGAAATCGACGCTTTGCTGCAAGAGTTTGCCGACCGCAACTGGCAATCCG
ACCGGCGCTATGCCGAAAGCTACGTATACAGCAAAGGCAGCCGCTACGGCCGCCTGCGCCTTGCCCAAGGCCTGCAACAG
CAAAAGCTGGACAGCGAGCTCATCGAAGCCGCCCTGCCCGGGCACGACAGCGAACGCGCCACCGCCTGCGCCGTGCTGCG
TAAAAAGTTCAAACAGCCCCCCGCCGACTTCGCCGCACAGCAACGCGCCGCCCGCTTCCTCGCCTACCGCGGCTTCGACC
ACGACACCATCCGCCACGCACTGGATAAGGCCTGGCAGGACGAAGAAGAGTGGGATGAATAA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(35-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1A9RTG6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

53.595

100

0.536