Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   K8P07_RS15145 Genome accession   NZ_CP082860
Coordinates   3133157..3133783 (-) Length   208 a.a.
NCBI ID   WP_020884792.1    Uniprot ID   A0A839BJN6
Organism   Enterobacter ludwigii strain FDAARGOS_1475     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3128157..3138783
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K8P07_RS15130 (K8P07_15075) helD 3128394..3130448 (-) 2055 WP_223398230.1 DNA helicase IV -
  K8P07_RS15135 (K8P07_15080) - 3130572..3131018 (+) 447 WP_020884790.1 YccF domain-containing protein -
  K8P07_RS15140 (K8P07_15085) yccS 3131038..3133200 (+) 2163 WP_223398231.1 YccS family putative transporter -
  K8P07_RS15145 (K8P07_15090) sxy/tfoX 3133157..3133783 (-) 627 WP_020884792.1 TfoX/Sxy family DNA transformation protein Regulator
  K8P07_RS15150 (K8P07_15095) sulA 3134001..3134510 (+) 510 WP_025204536.1 SOS-induced cell division inhibitor SulA -
  K8P07_RS15155 (K8P07_15100) ompA 3134865..3135920 (+) 1056 WP_020884794.1 porin OmpA -
  K8P07_RS15160 (K8P07_15105) matP 3135990..3136442 (-) 453 WP_014169429.1 macrodomain Ter protein MatP -
  K8P07_RS15165 (K8P07_15110) - 3136629..3138389 (+) 1761 WP_020884795.1 Lon protease family protein -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23864.38 Da        Isoelectric Point: 9.2489

>NTDB_id=603186 K8P07_RS15145 WP_020884792.1 3133157..3133783(-) (sxy/tfoX) [Enterobacter ludwigii strain FDAARGOS_1475]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDDAVFAMVSDGELYLRACEESAKYCVKNASSFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSSFALNAARKERSQRDRRNRLKDLPNLTFQLEVLLFEAGITDEETLRELGARASWLKMRAKN
KALSIKVLFALEGAIAGLHEAALPAGIRRELTEWFNALPEPQENHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=603186 K8P07_RS15145 WP_020884792.1 3133157..3133783(-) (sxy/tfoX) [Enterobacter ludwigii strain FDAARGOS_1475]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCCCAGGAATACCTTTCACCCTTAGGTGAAATCCACCATCGTGCGCT
GTTCGGGGGGTATACCCTGGCCGTAGATGATGCCGTCTTCGCTATGGTCTCCGACGGGGAACTGTATCTCCGGGCCTGTG
AGGAAAGTGCAAAATACTGTGTAAAAAATGCCTCATCATTCTTAACCCTGATGAAACGGGGTCGCCCGGTGCTGCTCAAT
TATTATCGTGTCGATGACGGACTGTGGCAGGACAGAGAACGGCTGCTTCAGCTCTCCTCGTTCGCGCTCAATGCGGCACG
AAAAGAGCGTTCGCAGCGTGATCGGCGAAACCGCCTCAAGGACTTGCCCAATCTCACCTTTCAGCTTGAAGTGCTGCTCT
TTGAAGCCGGAATCACTGATGAAGAGACGCTGCGGGAGCTGGGTGCCCGTGCGAGCTGGCTGAAGATGCGGGCGAAGAAT
AAAGCGCTCAGCATTAAAGTGCTCTTCGCACTGGAAGGGGCCATCGCCGGACTTCATGAAGCGGCACTCCCGGCGGGAAT
TCGCCGGGAGTTAACGGAGTGGTTTAATGCGCTGCCTGAGCCACAGGAGAATCACTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A839BJN6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

59.113

97.596

0.577