Detailed information    

insolico Bioinformatically predicted

Overview

Name   oppA   Type   Regulator
Locus tag   K8O88_RS02745 Genome accession   NZ_CP082858
Coordinates   580698..582482 (-) Length   594 a.a.
NCBI ID   WP_039849211.1    Uniprot ID   -
Organism   Granulicatella adiacens strain FDAARGOS_1477     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 575698..587482
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K8O88_RS02720 (K8O88_02715) - 575923..576378 (-) 456 WP_005607308.1 hypothetical protein -
  K8O88_RS02725 (K8O88_02720) - 576538..577458 (-) 921 WP_005607310.1 ABC transporter permease -
  K8O88_RS02730 (K8O88_02725) opp4B 577477..578439 (-) 963 WP_039849210.1 oligopeptide ABC transporter permease -
  K8O88_RS02735 (K8O88_02730) - 578442..579386 (-) 945 WP_005607315.1 ABC transporter ATP-binding protein -
  K8O88_RS02740 (K8O88_02735) - 579386..580387 (-) 1002 WP_005607318.1 ABC transporter ATP-binding protein -
  K8O88_RS02745 (K8O88_02740) oppA 580698..582482 (-) 1785 WP_039849211.1 oligopeptide ABC transporter substrate-binding protein Regulator
  K8O88_RS02750 (K8O88_02745) oppA 582679..584478 (-) 1800 WP_039849212.1 oligopeptide ABC transporter substrate-binding protein Regulator
  K8O88_RS02755 (K8O88_02750) - 584723..586516 (-) 1794 WP_005607328.1 oligopeptide ABC transporter substrate-binding protein -
  K8O88_RS02760 (K8O88_02755) acpP 586774..587016 (-) 243 WP_039849213.1 acyl carrier protein -

Sequence

Protein


Download         Length: 594 a.a.        Molecular weight: 65961.59 Da        Isoelectric Point: 4.6426

>NTDB_id=603144 K8O88_RS02745 WP_039849211.1 580698..582482(-) (oppA) [Granulicatella adiacens strain FDAARGOS_1477]
MNKKKMMILFSATTALTLAACGGNNSSSSTTSTEAGTAKTKYASEVTHEGTPIKGGTLKYAIVSSSPFSGIFADELSQVT
TDSTIGGLIDESMFEYDENRKLTNTGLASIKFDVENKTATVTLNSKEYKWSDGQPVTIDDYIFAYQAIGNKDYTGVRYDG
DFKNVVGMEDYHNGKADSVSGLEKVDDYTVKIHFKEMSPSMQLAGGSVSAYIMPKHIFKDIPEAEWEQSDYVRSKKFVGL
GQFKIDSIVAGESVTLVPNEHYYKGVAKVDKVVMEVVSPDNIVSEMKAGNYDIATMPNAQYEAYKDLTNVTFLSSQESAY
EYIGFHLGKYDNAAGKNVTDPNAKMSDANLRQAMAYALDVEAAGQNLYNGLQHASNSIIIPFFKDVYNKDQEGFTYNPEK
AKQLLDEAGYKDVDGDGLRENKDGSKLKITFAARTRDEANESLVQQYLNWWKEIGLDVQLYTGRTIELNSFYDKIQADDP
EIDVFAAGWSTGYDPNPEGLFGETAKFNFERYVDPEGNAIMKKISSTEAFDSAKNIEFYKEWQKYVHDKAFIFPTLVGES
ITAVNKRVKYFDVNLGSQKSALYQIELTSDTAAK

Nucleotide


Download         Length: 1785 bp        

>NTDB_id=603144 K8O88_RS02745 WP_039849211.1 580698..582482(-) (oppA) [Granulicatella adiacens strain FDAARGOS_1477]
ATGAACAAGAAAAAAATGATGATTTTGTTTTCTGCAACGACAGCTTTAACTTTAGCTGCTTGTGGCGGAAATAATAGTAG
TTCGTCGACAACAAGTACTGAAGCCGGTACAGCCAAAACGAAGTATGCATCAGAAGTCACTCATGAAGGCACGCCGATTA
AAGGTGGCACATTAAAATATGCTATCGTATCTTCATCACCGTTTTCTGGGATTTTTGCAGATGAGTTGTCTCAAGTCACT
ACTGATTCAACTATCGGGGGTCTTATAGATGAAAGCATGTTTGAATATGATGAGAACCGTAAATTAACCAATACGGGTCT
AGCAAGTATTAAATTTGATGTTGAGAATAAAACAGCAACGGTCACTTTAAATTCAAAAGAGTATAAATGGTCTGATGGCC
AACCAGTGACAATCGATGACTATATTTTCGCTTATCAAGCCATCGGAAATAAAGACTATACAGGTGTTCGTTACGACGGT
GATTTTAAAAATGTCGTTGGGATGGAAGACTATCACAATGGAAAAGCAGATAGTGTTTCAGGTCTTGAAAAAGTGGATGA
TTACACGGTGAAAATTCACTTCAAAGAAATGAGCCCTTCAATGCAATTAGCCGGTGGTTCTGTTTCTGCTTATATTATGC
CGAAACATATCTTCAAAGACATTCCTGAAGCGGAGTGGGAACAAAGTGATTACGTTCGTAGTAAAAAATTCGTTGGTCTT
GGACAATTCAAAATTGATTCTATTGTAGCCGGTGAATCTGTAACACTCGTTCCAAATGAACACTATTATAAAGGTGTAGC
AAAAGTTGATAAAGTCGTAATGGAAGTCGTTTCACCAGATAATATCGTGTCAGAAATGAAAGCTGGGAATTACGATATCG
CGACAATGCCAAACGCGCAATATGAAGCTTATAAAGATTTAACAAATGTGACTTTCTTAAGTTCACAAGAATCAGCCTAT
GAATATATCGGTTTCCACTTAGGAAAATATGATAATGCTGCAGGTAAAAATGTAACAGATCCAAATGCAAAAATGAGTGA
TGCAAACCTACGTCAAGCGATGGCGTATGCACTAGATGTTGAAGCAGCGGGTCAAAACTTGTATAACGGATTACAACATG
CCTCAAATTCTATTATCATTCCGTTCTTTAAAGATGTTTATAATAAAGACCAAGAAGGATTTACTTACAATCCTGAAAAA
GCGAAACAATTATTGGATGAAGCAGGATATAAAGATGTGGATGGAGATGGACTTCGTGAAAACAAAGACGGTTCTAAGTT
GAAAATTACTTTTGCCGCTCGTACACGTGACGAAGCCAACGAATCATTAGTACAACAATACTTAAACTGGTGGAAAGAAA
TCGGGTTAGACGTTCAACTGTACACAGGACGTACGATTGAATTGAACTCATTCTATGATAAAATCCAAGCGGATGATCCA
GAAATCGATGTGTTTGCAGCAGGATGGTCAACAGGTTACGATCCAAACCCAGAAGGATTGTTTGGGGAAACAGCGAAATT
TAACTTCGAACGTTATGTAGATCCAGAAGGAAATGCAATCATGAAGAAAATCAGTTCAACAGAAGCCTTTGACTCAGCGA
AAAACATTGAGTTCTACAAAGAATGGCAAAAATACGTTCATGATAAAGCGTTTATCTTCCCAACGTTAGTCGGAGAATCG
ATTACTGCTGTTAACAAACGTGTGAAATACTTCGATGTTAACTTAGGTAGTCAAAAATCAGCTCTATATCAAATCGAATT
AACGAGTGATACAGCAGCGAAATAA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(115-500)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  oppA Streptococcus suis isolate S10

55.259

100

0.557