Detailed information
Bioinformatically predicted
Overview
| Name | sxy/tfoX | Type | Regulator |
| Locus tag | K8O83_RS01135 | Genome accession | NZ_CP082857 |
| Coordinates | 183991..184644 (-) | Length | 217 a.a. |
| NCBI ID | WP_006995324.1 | Uniprot ID | - |
| Organism | Haemophilus aegyptius strain FDAARGOS_1478 | ||
| Function | positive regulator of competence gene (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 142913..187002 | 183991..184644 | within | 0 |
Gene organization within MGE regions
Location: 142913..187002
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K8O83_RS00840 (K8O83_00840) | - | 142913..143923 (-) | 1011 | WP_006995367.1 | phage portal protein | - |
| K8O83_RS00845 (K8O83_00845) | - | 143933..145645 (-) | 1713 | Protein_160 | terminase large subunit domain-containing protein | - |
| K8O83_RS00850 (K8O83_00850) | - | 146136..146780 (+) | 645 | WP_006995363.1 | phage repressor protein | - |
| K8O83_RS00855 (K8O83_00855) | - | 146958..147773 (+) | 816 | WP_006995362.1 | GPO family capsid scaffolding protein | - |
| K8O83_RS00860 (K8O83_00860) | - | 147795..148844 (+) | 1050 | WP_006995361.1 | phage major capsid protein, P2 family | - |
| K8O83_RS00865 (K8O83_00865) | gpM | 148856..149506 (+) | 651 | WP_006995360.1 | phage terminase small subunit | - |
| K8O83_RS00870 (K8O83_00870) | - | 149799..150305 (+) | 507 | WP_006995358.1 | head completion/stabilization protein | - |
| K8O83_RS00875 (K8O83_00875) | - | 150305..150514 (+) | 210 | WP_005668467.1 | tail protein X | - |
| K8O83_RS00880 (K8O83_00880) | - | 150516..150737 (+) | 222 | WP_006995357.1 | phage holin | - |
| K8O83_RS00885 (K8O83_00885) | - | 150730..151248 (+) | 519 | WP_005653059.1 | lysozyme | - |
| K8O83_RS00890 (K8O83_00890) | - | 151233..151583 (+) | 351 | WP_006995356.1 | hypothetical protein | - |
| K8O83_RS00895 (K8O83_00895) | lysC | 151498..151761 (+) | 264 | WP_005672206.1 | Rz1-like lysis system protein LysC | - |
| K8O83_RS00900 (K8O83_00900) | - | 151758..151973 (+) | 216 | WP_006995354.1 | TraR/DksA family transcriptional regulator | - |
| K8O83_RS00905 (K8O83_00905) | - | 151970..152440 (+) | 471 | WP_006995353.1 | phage tail protein | - |
| K8O83_RS00910 (K8O83_00910) | - | 152440..152898 (+) | 459 | WP_006995352.1 | phage virion morphogenesis protein | - |
| K8O83_RS00915 (K8O83_00915) | - | 152876..153148 (-) | 273 | WP_006995351.1 | hypothetical protein | - |
| K8O83_RS00920 (K8O83_00920) | - | 153218..155953 (+) | 2736 | WP_006995350.1 | phage tail tape measure protein | - |
| K8O83_RS00925 (K8O83_00925) | - | 156030..156197 (+) | 168 | WP_006995349.1 | hypothetical protein | - |
| K8O83_RS00930 (K8O83_00930) | - | 156175..156627 (+) | 453 | WP_006995348.1 | hypothetical protein | - |
| K8O83_RS00935 (K8O83_00935) | - | 156728..157327 (+) | 600 | WP_005668437.1 | phage baseplate assembly protein V | - |
| K8O83_RS00940 (K8O83_00940) | - | 157329..157667 (+) | 339 | WP_005633786.1 | GPW/gp25 family protein | - |
| K8O83_RS00945 (K8O83_00945) | - | 157664..158578 (+) | 915 | WP_006995347.1 | baseplate J/gp47 family protein | - |
| K8O83_RS00950 (K8O83_00950) | - | 158568..159104 (+) | 537 | WP_006995346.1 | phage tail protein I | - |
| K8O83_RS00955 (K8O83_00955) | - | 159113..161359 (+) | 2247 | WP_006995345.1 | phage tail protein | - |
| K8O83_RS00960 (K8O83_00960) | - | 161371..161973 (+) | 603 | WP_005661624.1 | hypothetical protein | - |
| K8O83_RS00965 (K8O83_00965) | - | 161970..162470 (+) | 501 | WP_065246943.1 | enoyl-CoA hydratase | - |
| K8O83_RS00970 (K8O83_00970) | - | 162646..162765 (+) | 120 | WP_005641687.1 | Com family DNA-binding transcriptional regulator | - |
| K8O83_RS00975 (K8O83_00975) | - | 162822..163667 (+) | 846 | WP_006995342.1 | hypothetical protein | - |
| K8O83_RS00985 (K8O83_00980) | - | 164112..165296 (+) | 1185 | WP_006995341.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| K8O83_RS00990 (K8O83_00985) | - | 165300..165806 (+) | 507 | WP_006995340.1 | phage major tail tube protein | - |
| K8O83_RS00995 (K8O83_00990) | - | 165875..166174 (+) | 300 | WP_005655095.1 | phage tail assembly protein | - |
| K8O83_RS01000 (K8O83_00995) | - | 166174..166320 (+) | 147 | WP_006995339.1 | GpE family phage tail protein | - |
| K8O83_RS01005 (K8O83_01000) | - | 166488..166649 (+) | 162 | WP_006995337.1 | hypothetical protein | - |
| K8O83_RS01010 (K8O83_01005) | - | 166649..167086 (+) | 438 | WP_006995336.1 | phage tail protein | - |
| K8O83_RS01015 (K8O83_01010) | - | 167086..168285 (+) | 1200 | WP_006995335.1 | phage late control D family protein | - |
| K8O83_RS01020 (K8O83_01015) | - | 168311..168550 (-) | 240 | WP_032826252.1 | excalibur calcium-binding domain-containing protein | - |
| K8O83_RS01025 (K8O83_01020) | - | 168561..169730 (-) | 1170 | WP_006995333.1 | hypothetical protein | - |
| K8O83_RS01030 (K8O83_01025) | - | 169740..170429 (-) | 690 | WP_006995332.1 | S24 family peptidase | - |
| K8O83_RS01035 (K8O83_01030) | - | 170548..170796 (+) | 249 | WP_013527354.1 | helix-turn-helix domain-containing protein | - |
| K8O83_RS01040 (K8O83_01035) | - | 171161..171502 (+) | 342 | WP_032826251.1 | hypothetical protein | - |
| K8O83_RS01045 (K8O83_01040) | - | 171565..171807 (+) | 243 | WP_005655063.1 | hypothetical protein | - |
| K8O83_RS01050 (K8O83_01045) | - | 171898..172158 (+) | 261 | WP_006995329.1 | hypothetical protein | - |
| K8O83_RS01055 (K8O83_01050) | - | 172176..172556 (+) | 381 | WP_006995328.1 | hypothetical protein | - |
| K8O83_RS01060 (K8O83_01055) | - | 172560..172802 (+) | 243 | WP_005668404.1 | hypothetical protein | - |
| K8O83_RS01065 (K8O83_01060) | - | 172928..173236 (+) | 309 | WP_005655052.1 | hypothetical protein | - |
| K8O83_RS01070 (K8O83_01065) | - | 173246..175432 (+) | 2187 | WP_006995326.1 | replication endonuclease | - |
| K8O83_RS01075 (K8O83_01070) | - | 175451..175642 (+) | 192 | WP_005668397.1 | hypothetical protein | - |
| K8O83_RS01080 (K8O83_01075) | - | 175653..175862 (+) | 210 | WP_005668395.1 | hypothetical protein | - |
| K8O83_RS01085 (K8O83_01080) | - | 175876..176397 (+) | 522 | WP_005668393.1 | MazG-like family protein | - |
| K8O83_RS01090 (K8O83_01085) | - | 176636..177691 (+) | 1056 | WP_032826250.1 | site-specific integrase | - |
| K8O83_RS01135 (K8O83_01130) | sxy/tfoX | 183991..184644 (-) | 654 | WP_006995324.1 | DNA transformation protein TfoX | Regulator |
| K8O83_RS01140 (K8O83_01135) | recA | 185017..186081 (+) | 1065 | WP_005654959.1 | recombinase RecA | Machinery gene |
| K8O83_RS01145 (K8O83_01140) | recX | 186161..186619 (+) | 459 | WP_006995323.1 | recombination regulator RecX | - |
| K8O83_RS01150 (K8O83_01145) | crcB | 186616..187002 (-) | 387 | WP_005692779.1 | fluoride efflux transporter CrcB | - |
Sequence
Protein
Download Length: 217 a.a. Molecular weight: 24987.35 Da Isoelectric Point: 10.0171
>NTDB_id=603103 K8O83_RS01135 WP_006995324.1 183991..184644(-) (sxy/tfoX) [Haemophilus aegyptius strain FDAARGOS_1478]
MNIKDEHIDSVCSLLDQLVGNVSFKNLFTGYGLFHKEETMFAIWQNKKLYLRGEGVLAIQLTKLGCEPFTTNELNKRFVL
SQYYALSDQVLRSNRLCRKLIILSIKQILEQKLECTLRKLNRLKDLPNLTIKHERALIKVGITNVAMLREIGAENALVEL
KKSGSGATLDFYWKLVCALQNKNSQMLSQAEKERLLKKLNEVLRKNGLKGYRKLDDE
MNIKDEHIDSVCSLLDQLVGNVSFKNLFTGYGLFHKEETMFAIWQNKKLYLRGEGVLAIQLTKLGCEPFTTNELNKRFVL
SQYYALSDQVLRSNRLCRKLIILSIKQILEQKLECTLRKLNRLKDLPNLTIKHERALIKVGITNVAMLREIGAENALVEL
KKSGSGATLDFYWKLVCALQNKNSQMLSQAEKERLLKKLNEVLRKNGLKGYRKLDDE
Nucleotide
Download Length: 654 bp
>NTDB_id=603103 K8O83_RS01135 WP_006995324.1 183991..184644(-) (sxy/tfoX) [Haemophilus aegyptius strain FDAARGOS_1478]
ATGAATATAAAGGATGAGCATATAGATAGCGTTTGCTCCTTGTTAGATCAGTTAGTAGGAAATGTTTCCTTTAAAAATCT
TTTTACTGGTTACGGTTTGTTTCACAAGGAAGAGACAATGTTTGCCATTTGGCAAAATAAAAAACTTTATTTACGCGGTG
AGGGTGTTCTCGCAATTCAATTAACTAAATTAGGTTGTGAACCTTTTACAACGAATGAATTGAATAAGCGGTTTGTGCTT
TCACAATATTATGCACTTTCTGATCAGGTTTTACGTAGTAATAGATTGTGTAGAAAATTGATTATTCTTTCTATTAAGCA
GATTCTTGAGCAGAAGCTAGAATGTACGTTAAGAAAATTGAATCGATTAAAGGATTTACCCAATTTAACGATTAAACATG
AAAGAGCTTTAATAAAAGTTGGTATTACAAATGTTGCGATGCTAAGAGAGATTGGCGCAGAAAATGCATTGGTGGAATTA
AAGAAAAGTGGCAGTGGTGCTACGCTTGATTTTTATTGGAAATTAGTATGTGCTTTGCAAAATAAAAATAGTCAGATGTT
AAGTCAAGCTGAAAAAGAGCGTTTATTGAAGAAATTAAACGAAGTTTTGAGAAAAAATGGCTTAAAAGGCTATAGAAAAT
TAGATGATGAATAA
ATGAATATAAAGGATGAGCATATAGATAGCGTTTGCTCCTTGTTAGATCAGTTAGTAGGAAATGTTTCCTTTAAAAATCT
TTTTACTGGTTACGGTTTGTTTCACAAGGAAGAGACAATGTTTGCCATTTGGCAAAATAAAAAACTTTATTTACGCGGTG
AGGGTGTTCTCGCAATTCAATTAACTAAATTAGGTTGTGAACCTTTTACAACGAATGAATTGAATAAGCGGTTTGTGCTT
TCACAATATTATGCACTTTCTGATCAGGTTTTACGTAGTAATAGATTGTGTAGAAAATTGATTATTCTTTCTATTAAGCA
GATTCTTGAGCAGAAGCTAGAATGTACGTTAAGAAAATTGAATCGATTAAAGGATTTACCCAATTTAACGATTAAACATG
AAAGAGCTTTAATAAAAGTTGGTATTACAAATGTTGCGATGCTAAGAGAGATTGGCGCAGAAAATGCATTGGTGGAATTA
AAGAAAAGTGGCAGTGGTGCTACGCTTGATTTTTATTGGAAATTAGTATGTGCTTTGCAAAATAAAAATAGTCAGATGTT
AAGTCAAGCTGAAAAAGAGCGTTTATTGAAGAAATTAAACGAAGTTTTGAGAAAAAATGGCTTAAAAGGCTATAGAAAAT
TAGATGATGAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sxy/tfoX | Haemophilus influenzae Rd KW20 |
99.078 |
100 |
0.991 |