Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilE   Type   Machinery gene
Locus tag   K8O89_RS04550 Genome accession   NZ_CP082852
Coordinates   1018514..1018939 (+) Length   141 a.a.
NCBI ID   WP_019234240.1    Uniprot ID   -
Organism   Legionella anisa strain FDAARGOS_1480     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1013514..1023939
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K8O89_RS04520 (K8O89_04525) - 1014546..1015538 (+) 993 WP_019234245.1 polysaccharide deacetylase family protein -
  K8O89_RS04525 - 1015724..1015801 (+) 78 Protein_892 prepilin-type N-terminal cleavage/methylation domain-containing protein -
  K8O89_RS04530 (K8O89_04530) fimT 1015829..1016248 (+) 420 WP_223499628.1 GspH/FimT family protein Machinery gene
  K8O89_RS04535 (K8O89_04535) pilV 1016260..1016802 (+) 543 WP_019234243.1 type IV pilus modification protein PilV -
  K8O89_RS04540 (K8O89_04540) - 1016799..1017866 (+) 1068 WP_019234242.1 PilW family protein -
  K8O89_RS04545 (K8O89_04545) - 1017983..1018504 (+) 522 WP_051045716.1 pilus assembly protein -
  K8O89_RS04550 (K8O89_04550) pilE 1018514..1018939 (+) 426 WP_019234240.1 type IV pilin protein Machinery gene
  K8O89_RS04555 (K8O89_04555) comEC 1019075..1021294 (+) 2220 WP_040522858.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  K8O89_RS04560 (K8O89_04560) - 1021499..1022548 (+) 1050 WP_019234238.1 bifunctional transcriptional activator/DNA repair enzyme AdaA -
  K8O89_RS04565 (K8O89_04565) - 1022665..1023456 (-) 792 WP_019234237.1 hypothetical protein -
  K8O89_RS04570 (K8O89_04570) - 1023552..1023833 (-) 282 WP_019234236.1 hypothetical protein -

Sequence

Protein


Download         Length: 141 a.a.        Molecular weight: 15124.24 Da        Isoelectric Point: 4.8536

>NTDB_id=603041 K8O89_RS04550 WP_019234240.1 1018514..1018939(+) (pilE) [Legionella anisa strain FDAARGOS_1480]
MMNNARKQGFTLIELMIAVLIIAILATIAYPSYLNFVLKSRRSDAMATLAQDQLILERCYSQNFSYNAPCGSLPAFPQTS
AQGFYSIVLSNVGATTYTLTATPIGSQAEDTTCASMTVDQSNAKTAVDSSGTAQTICWSPT

Nucleotide


Download         Length: 426 bp        

>NTDB_id=603041 K8O89_RS04550 WP_019234240.1 1018514..1018939(+) (pilE) [Legionella anisa strain FDAARGOS_1480]
ATGATGAACAATGCACGAAAACAAGGATTTACCTTAATTGAATTAATGATAGCAGTACTTATTATAGCCATACTGGCTAC
AATAGCCTATCCGTCCTATCTCAATTTCGTGCTAAAATCGCGTCGTTCCGATGCTATGGCCACATTAGCACAAGATCAGC
TCATTTTAGAACGGTGTTATTCACAAAATTTTTCTTATAATGCTCCTTGCGGCTCATTACCTGCATTTCCGCAAACATCG
GCTCAAGGGTTCTACAGTATTGTCTTATCTAATGTAGGAGCAACAACATATACACTCACAGCAACACCAATTGGGAGTCA
AGCTGAAGATACAACTTGTGCCAGCATGACAGTGGATCAATCGAACGCAAAAACCGCTGTAGATTCATCAGGAACTGCAC
AAACCATTTGTTGGAGTCCGACATAA

Domains

Predicted by InterproScan.

Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS)

(31-117)

Prokaryotic N-terminal methylation motif (N_methyl)

(5-30)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilE Legionella pneumophila str. Paris

64.539

100

0.645
  pilE Legionella pneumophila strain ERS1305867

64.539

100

0.645