Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   K8O89_RS02285 Genome accession   NZ_CP082852
Coordinates   510828..511157 (-) Length   109 a.a.
NCBI ID   WP_019235057.1    Uniprot ID   A0AAX0WS08
Organism   Legionella anisa strain FDAARGOS_1480     
Function   dsDNA binding (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 505828..516157
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K8O89_RS02270 (K8O89_02275) mreC 506095..507000 (-) 906 WP_040523240.1 rod shape-determining protein MreC -
  K8O89_RS02275 (K8O89_02280) - 506978..508015 (-) 1038 WP_003636696.1 rod shape-determining protein -
  K8O89_RS02280 (K8O89_02285) - 508348..510558 (+) 2211 WP_019235058.1 hypothetical protein -
  K8O89_RS02285 (K8O89_02290) comEA 510828..511157 (-) 330 WP_019235057.1 helix-hairpin-helix domain-containing protein Machinery gene
  K8O89_RS02290 (K8O89_02295) - 511591..512994 (-) 1404 WP_019235056.1 M20 family metallopeptidase -
  K8O89_RS02295 (K8O89_02300) - 512969..514060 (-) 1092 WP_019235055.1 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase -
  K8O89_RS02300 (K8O89_02305) nadC 514057..514899 (-) 843 WP_019235054.1 carboxylating nicotinate-nucleotide diphosphorylase -

Sequence

Protein


Download         Length: 109 a.a.        Molecular weight: 11815.96 Da        Isoelectric Point: 10.6949

>NTDB_id=603039 K8O89_RS02285 WP_019235057.1 510828..511157(-) (comEA) [Legionella anisa strain FDAARGOS_1480]
MKAKFIAAVLSLSAVTLSAHAVLAKESSIKIKPPVVIHKIDLNTADLSMLTGSVKGIGKKRAEAIIAYRKSHHGFKSLEE
LAEVKGLGQHFVTANRDKLNQVFVVNKIE

Nucleotide


Download         Length: 330 bp        

>NTDB_id=603039 K8O89_RS02285 WP_019235057.1 510828..511157(-) (comEA) [Legionella anisa strain FDAARGOS_1480]
ATGAAAGCAAAATTTATTGCTGCTGTATTGTCATTGTCTGCAGTTACTCTATCTGCTCATGCAGTCCTTGCTAAAGAAAG
TTCGATCAAAATAAAGCCTCCTGTAGTCATTCATAAAATTGATCTGAATACCGCTGATTTATCCATGCTTACCGGCTCAG
TTAAAGGCATAGGGAAAAAACGAGCGGAAGCAATTATTGCCTATCGAAAAAGTCACCACGGCTTTAAATCTTTGGAGGAG
CTTGCTGAGGTGAAAGGCCTAGGACAACATTTTGTGACTGCGAATCGAGATAAATTGAATCAAGTGTTTGTTGTTAATAA
AATAGAATAA

Domains

Predicted by InterproScan.

Helix-hairpin-helix motif (HHH_3)

(37-99)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Legionella pneumophila str. Paris

58.491

97.248

0.569
  comEA Legionella pneumophila strain ERS1305867

58.491

97.248

0.569