Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilZ   Type   Machinery gene
Locus tag   K8O89_RS00435 Genome accession   NZ_CP082852
Coordinates   93030..93368 (-) Length   112 a.a.
NCBI ID   WP_019232166.1    Uniprot ID   -
Organism   Legionella anisa strain FDAARGOS_1480     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 88030..98368
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K8O89_RS00415 (K8O89_00415) - 88513..89406 (+) 894 WP_019232170.1 LirA/MavJ family T4SS effector -
  K8O89_RS00420 (K8O89_00420) - 89463..90758 (-) 1296 WP_040521939.1 MFS transporter -
  K8O89_RS00425 (K8O89_00425) - 90976..92070 (-) 1095 WP_019232168.1 anhydro-N-acetylmuramic acid kinase -
  K8O89_RS00430 (K8O89_00430) - 92225..93001 (-) 777 WP_019232167.1 TatD family hydrolase -
  K8O89_RS00435 (K8O89_00435) pilZ 93030..93368 (-) 339 WP_019232166.1 PilZ domain-containing protein Machinery gene
  K8O89_RS00440 (K8O89_00440) - 93450..94391 (-) 942 WP_058388493.1 DNA polymerase III subunit delta' -
  K8O89_RS00445 (K8O89_00445) tmk 94388..95026 (-) 639 WP_019232164.1 dTMP kinase -
  K8O89_RS00450 (K8O89_00450) mltG 95026..96024 (-) 999 WP_019232163.1 endolytic transglycosylase MltG -
  K8O89_RS00455 (K8O89_00455) fabF 96025..97263 (-) 1239 WP_040521937.1 beta-ketoacyl-ACP synthase II -
  K8O89_RS00460 (K8O89_00460) acpP 97340..97588 (-) 249 WP_003631752.1 acyl carrier protein -

Sequence

Protein


Download         Length: 112 a.a.        Molecular weight: 12432.38 Da        Isoelectric Point: 5.7681

>NTDB_id=603034 K8O89_RS00435 WP_019232166.1 93030..93368(-) (pilZ) [Legionella anisa strain FDAARGOS_1480]
MDTIHQINCTFLNESALYAAYMPFIKGGGLFIRTNTNYLFGSTVNLLIKLMDEDEIYVVDGKVVWITPKGAQGNKVPGIG
VQFIGENSRYVCNKIETYLAGMLKSSQLTDTI

Nucleotide


Download         Length: 339 bp        

>NTDB_id=603034 K8O89_RS00435 WP_019232166.1 93030..93368(-) (pilZ) [Legionella anisa strain FDAARGOS_1480]
ATGGATACAATTCACCAGATCAATTGCACATTTCTTAATGAATCAGCATTATATGCAGCTTATATGCCTTTTATAAAAGG
AGGCGGGTTATTTATCCGTACTAATACAAATTATTTGTTTGGTTCAACAGTTAATTTATTGATTAAATTAATGGATGAGG
ATGAGATCTATGTAGTCGATGGGAAAGTAGTTTGGATTACACCTAAGGGGGCTCAGGGTAATAAAGTACCTGGAATAGGG
GTACAATTTATTGGTGAAAACAGTCGCTACGTGTGTAATAAAATAGAGACCTATTTGGCAGGCATGTTAAAATCCTCGCA
ATTAACCGATACAATTTAG

Domains

Predicted by InterproScan.

PilZ domain (PilZ)

(6-100)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilZ Legionella pneumophila str. Paris

70.755

94.643

0.67
  pilZ Legionella pneumophila strain ERS1305867

70.755

94.643

0.67