Detailed information    

insolico Bioinformatically predicted

Overview


Name   lqsT   Type   Regulator
Locus tag   K8O97_RS14660 Genome accession   NZ_CP082848
Coordinates   3278483..3279745 (+) Length   420 a.a.
NCBI ID   WP_014844654.1    Uniprot ID   -
Organism   Legionella pneumophila strain FDAARGOS_1482     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 3273483..3284745
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K8O97_RS14650 (K8O97_14595) ceg32 3274366..3277194 (+) 2829 WP_061639850.1 Dot/Icm T4SS effector Ceg32/SidI -
  K8O97_RS14655 (K8O97_14600) mesI 3277196..3278086 (+) 891 WP_080452207.1 Dot/Icm T4SS effector metaeffector MesI -
  K8O97_RS14660 (K8O97_14605) lqsT 3278483..3279745 (+) 1263 WP_014844654.1 HAMP domain-containing sensor histidine kinase Regulator
  K8O97_RS14665 (K8O97_14610) - 3279793..3280488 (-) 696 WP_014844655.1 iron-containing redox enzyme family protein -
  K8O97_RS14670 (K8O97_14615) sdjA 3280895..3283318 (-) 2424 WP_061639851.1 Dot/Icm T4SS effector SdjA -
  K8O97_RS14675 (K8O97_14620) dupB 3283390..3284583 (-) 1194 WP_080272683.1 Dot/Icm T4SS effector deubiquitinase DupB/LaiF -

Sequence


Protein


Download         Length: 420 a.a.        Molecular weight: 48630.04 Da        Isoelectric Point: 7.7049

>NTDB_id=602996 K8O97_RS14660 WP_014844654.1 3278483..3279745(+) (lqsT) [Legionella pneumophila strain FDAARGOS_1482]
MQRLKDIFTAIYQYLLKETEDASHQITLFGIVMMINYPLFGVFWKLEHFQLTEEFILRITAALLCACLAFNQFWPKQLLK
FLPVFWYIVLLFCLPYFFAYLTLINNGSTLWLMNCVSAIFFLLLVSSVLGALILLISGVGLAFFHFYILSNNQFVYIPGT
ISLFSLIVTFIAAIIIGALFARDREITYAGRLSGMRMLAGSIAHDLRTPLASIYLQAELQELIVERLNNPEVQKDLKENL
SKITRGIEMSNQLIRMQLNNIQRDKLDTSTFSIYSIKKLLKASLEEYPFKENQKSLIHLNDKNDFSIWIDEVGFKNMMWN
LLKNSLEYIEETHKGEISIWLEQGWEKENFNYLHIKDTAKGLNHKEYEKIFDFFYSGRKEGTGLGLAYCKLLMQAAGGDI
SCKGKKNEFAHFTLKFPKID

Nucleotide


Download         Length: 1263 bp        

>NTDB_id=602996 K8O97_RS14660 WP_014844654.1 3278483..3279745(+) (lqsT) [Legionella pneumophila strain FDAARGOS_1482]
ATGCAAAGGTTAAAAGATATATTTACTGCAATTTACCAATACTTATTAAAAGAAACTGAAGATGCAAGCCACCAAATCAC
TTTATTTGGCATCGTCATGATGATTAATTACCCTCTTTTCGGAGTTTTCTGGAAACTGGAGCATTTTCAACTGACAGAAG
AATTTATTTTACGCATCACTGCAGCCCTCCTCTGTGCCTGTTTGGCATTTAATCAATTTTGGCCAAAACAATTATTAAAA
TTTCTACCTGTTTTTTGGTATATAGTTCTGCTCTTTTGTTTGCCTTACTTTTTTGCTTATTTGACTCTTATAAACAATGG
TTCGACTCTTTGGTTAATGAATTGCGTATCCGCTATCTTTTTTCTTTTATTGGTTTCCAGTGTATTGGGGGCTCTTATAT
TACTTATATCAGGTGTTGGACTTGCTTTTTTTCATTTTTATATTTTATCAAATAATCAGTTTGTCTATATCCCCGGAACC
ATATCACTTTTTAGTTTAATTGTTACGTTTATTGCAGCAATAATCATTGGTGCCTTGTTTGCGCGAGATAGAGAAATTAC
CTATGCCGGACGTTTATCGGGTATGCGCATGCTGGCTGGAAGTATCGCTCATGATTTAAGAACGCCGCTTGCCAGTATTT
ATTTACAAGCCGAATTACAGGAATTGATTGTCGAAAGATTAAATAATCCAGAAGTTCAAAAGGACCTGAAGGAAAATTTA
AGCAAAATTACTCGCGGCATAGAAATGAGTAATCAATTAATTCGTATGCAATTAAATAATATTCAACGAGACAAATTAGA
TACCAGTACATTTTCGATTTATTCCATCAAAAAATTGCTCAAAGCGTCTTTAGAGGAATACCCTTTCAAAGAAAATCAAA
AATCATTGATTCATTTAAATGATAAAAATGATTTTTCCATATGGATTGATGAAGTGGGGTTTAAAAATATGATGTGGAAT
TTGCTAAAAAATAGTCTGGAATATATTGAGGAAACCCATAAAGGCGAAATCTCTATCTGGCTAGAACAAGGATGGGAGAA
AGAGAATTTTAATTACCTCCATATAAAAGATACAGCTAAAGGTTTAAATCATAAAGAGTATGAAAAAATATTTGATTTCT
TCTATTCTGGCAGAAAAGAAGGAACTGGTTTAGGCTTGGCCTATTGTAAACTTCTGATGCAAGCAGCAGGTGGTGATATT
TCCTGTAAAGGGAAAAAAAATGAATTCGCTCATTTCACTTTAAAATTCCCCAAAATTGATTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  lqsT Legionella pneumophila subsp. pneumophila str. Philadelphia 1

99.524

100

0.995