Detailed information NTG0602792

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: NH020_RS23525
• Genome accession: NZ_CP099754
• Coordinates: 4872203..4873228 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain 806883-9-2019
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4867203..4878228

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NH020_RS23515 (NH020_23515)	rpmE	4869434..4869646 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
NH020_RS23520 (NH020_23520)	priA	4869849..4872047 (+)	2199	WP_022646377.1	primosomal protein N'	Machinery gene
NH020_RS23525 (NH020_23525)	cytR	4872203..4873228 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
NH020_RS23530 (NH020_23530)	ftsN	4873320..4874279 (+)	960	WP_000068834.1	cell division protein FtsN	-
NH020_RS23535 (NH020_23535)	hslV	4874372..4874902 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
NH020_RS23540 (NH020_23540)	hslU	4874912..4876243 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
NH020_RS23545 (NH020_23545)	menA	4876310..4877236 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
NH020_RS23550 (NH020_23550)	rraA	4877329..4877814 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
NH020_RS23555 (NH020_23555)	zapB	4877899..4878144 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=602792 NH020_RS23525 WP_000644904.1 4872203..4873228(+) (cytR) [Escherichia coli strain 806883-9-2019]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=602792 NH020_RS23525 WP_000644904.1 4872203..4873228(+) (cytR) [Escherichia coli strain 806883-9-2019]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACCGTTCATATAGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGTGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628