Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   K8B76_RS08950 Genome accession   NZ_CP082820
Coordinates   1796018..1797055 (-) Length   345 a.a.
NCBI ID   WP_000727277.1    Uniprot ID   A0A0B7LHQ0
Organism   Streptococcus pneumoniae strain SCAID PHRX1-2021     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1791018..1802055
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K8B76_RS08925 (K8B76_08925) - 1791819..1793150 (-) 1332 WP_000390043.1 hemolysin family protein -
  K8B76_RS08930 (K8B76_08930) endA 1793379..1794203 (-) 825 WP_001036779.1 DNA-entry nuclease EndA Machinery gene
  K8B76_RS08935 (K8B76_08935) - 1794242..1794430 (-) 189 WP_001036519.1 DNA-directed RNA polymerase subunit beta -
  K8B76_RS08940 (K8B76_08940) murA 1794423..1795706 (-) 1284 WP_000358028.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  K8B76_RS08945 (K8B76_08945) - 1795730..1795960 (-) 231 WP_000250384.1 DUF1146 family protein -
  K8B76_RS08950 (K8B76_08950) sepM 1796018..1797055 (-) 1038 WP_000727277.1 SepM family pheromone-processing serine protease Regulator
  K8B76_RS08955 (K8B76_08955) coaD 1797039..1797527 (-) 489 WP_001280742.1 pantetheine-phosphate adenylyltransferase -
  K8B76_RS08960 (K8B76_08960) rsmD 1797517..1798056 (-) 540 WP_000706962.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  K8B76_RS08965 (K8B76_08965) asnA 1798121..1799113 (-) 993 WP_000747995.1 aspartate--ammonia ligase -
  K8B76_RS08970 (K8B76_08970) - 1799225..1799908 (-) 684 WP_001016917.1 Bax inhibitor-1/YccA family protein -
  K8B76_RS08975 (K8B76_08975) - 1799964..1800704 (-) 741 WP_000152673.1 RNA methyltransferase -
  K8B76_RS08980 (K8B76_08980) - 1800738..1801016 (+) 279 WP_001174613.1 acylphosphatase -
  K8B76_RS08985 (K8B76_08985) yidC 1801094..1802020 (+) 927 WP_000835947.1 membrane protein insertase YidC -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37537.57 Da        Isoelectric Point: 5.0724

>NTDB_id=602564 K8B76_RS08950 WP_000727277.1 1796018..1797055(-) (sepM) [Streptococcus pneumoniae strain SCAID PHRX1-2021]
MKKKIRWPLYVIAALIVTFLAFVVPLPYYIEVPGGSEDIRQVLKVNDTEDKEAGAYQFVTVGVQHATLAHMIYAWLTPFT
DIRSAQETTGGSSDVEFMRINQFYMQTSQNMAKYQGLKTAGKDIELKYFGVYVLNVTDNSTFKGILNISDTVTAVNDQTF
DSSKDLIDYVSSQKLGDSVKVTYEEDGQTKSAEGKIITLENGKNGIGIGLIDRTEVISNVPISFSTAGIGGPSAGLMFSL
AIYTQIAHPDLRNGRIVAGTGTIDRDGNVGDIGGIDKKVVASARAGAAIFFAPDNPVSEEEQKAHPDAKNNYQTALEAAK
TIKTDMKIVPVKTLQDAIDYLKNNP

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=602564 K8B76_RS08950 WP_000727277.1 1796018..1797055(-) (sepM) [Streptococcus pneumoniae strain SCAID PHRX1-2021]
ATGAAAAAAAAGATTAGATGGCCCTTATACGTCATTGCGGCCTTGATTGTGACTTTCTTGGCATTTGTAGTGCCCTTGCC
TTATTATATAGAGGTTCCAGGTGGTTCGGAAGATATTCGCCAAGTCCTTAAAGTAAATGACACAGAAGATAAGGAAGCTG
GTGCCTATCAATTCGTTACGGTTGGTGTTCAACATGCCACTTTAGCTCATATGATTTATGCTTGGTTGACACCTTTTACA
GATATTCGTAGTGCTCAGGAGACTACAGGTGGTTCTTCCGATGTTGAATTTATGCGAATCAATCAATTCTACATGCAAAC
ATCGCAAAATATGGCCAAGTATCAAGGACTAAAAACAGCTGGTAAGGATATCGAACTCAAGTACTTTGGAGTTTATGTTT
TGAATGTGACGGATAATTCAACCTTTAAAGGGATTCTCAATATCTCTGATACAGTCACAGCAGTCAATGATCAGACCTTT
GATAGTTCCAAAGACTTGATTGATTACGTCAGTTCTCAAAAATTAGGGGATTCCGTCAAGGTCACCTATGAAGAGGATGG
GCAAACCAAGTCTGCAGAAGGAAAGATTATCACCTTGGAAAATGGCAAAAATGGAATTGGAATCGGCTTGATTGATCGTA
CAGAGGTAATCAGCAATGTCCCAATTAGCTTTTCAACAGCTGGTATTGGCGGCCCAAGTGCTGGTCTCATGTTTAGTCTA
GCTATCTATACTCAAATAGCTCACCCAGATCTTCGTAATGGTCGTATTGTTGCCGGTACAGGTACCATTGACCGCGATGG
TAATGTGGGAGACATTGGAGGCATTGATAAGAAGGTTGTAGCTTCGGCTAGGGCAGGTGCTGCTATTTTCTTTGCTCCTG
ATAACCCTGTTAGCGAAGAAGAACAAAAGGCGCATCCGGACGCGAAAAACAACTACCAAACAGCCCTAGAAGCGGCTAAA
ACAATCAAGACGGATATGAAAATCGTGCCCGTTAAAACCCTACAAGATGCGATTGATTACTTGAAAAACAATCCCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0B7LHQ0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

59.649

99.13

0.591