Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   K7G42_RS09580 Genome accession   NZ_CP082783
Coordinates   1807903..1808628 (-) Length   241 a.a.
NCBI ID   WP_003105648.1    Uniprot ID   A0A0E2UCE4
Organism   Streptococcus parauberis strain KRS02083     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1802903..1813628
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K7G42_RS09545 (K7G42_09475) rnpM 1802948..1803244 (-) 297 WP_003104517.1 RNase P modulator RnpM -
  K7G42_RS09550 (K7G42_09480) nusA 1803260..1804414 (-) 1155 WP_003108096.1 transcription termination factor NusA -
  K7G42_RS09555 (K7G42_09485) rimP 1804503..1804985 (-) 483 WP_003107545.1 ribosome maturation factor RimP -
  K7G42_RS09565 (K7G42_09495) trmB 1805379..1806014 (-) 636 WP_003107546.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  K7G42_RS09570 (K7G42_09500) ccrZ 1806014..1806805 (-) 792 WP_003107547.1 cell cycle regulator CcrZ -
  K7G42_RS09575 (K7G42_09505) - 1806866..1807900 (-) 1035 WP_003107548.1 ABC transporter permease -
  K7G42_RS09580 (K7G42_09510) pptA 1807903..1808628 (-) 726 WP_003105648.1 ABC transporter ATP-binding protein Regulator
  K7G42_RS09585 (K7G42_09515) - 1808890..1809309 (+) 420 WP_003108095.1 HIT family protein -
  K7G42_RS09590 (K7G42_09520) - 1809306..1809608 (+) 303 WP_003108094.1 hypothetical protein -
  K7G42_RS09595 (K7G42_09525) brpA 1809641..1810930 (-) 1290 WP_003108093.1 biofilm formation/cell division transcriptional regulator BrpA -
  K7G42_RS09600 (K7G42_09530) - 1810939..1811463 (-) 525 WP_003107553.1 GNAT family N-acetyltransferase -
  K7G42_RS09605 (K7G42_09535) tsaE 1811450..1811899 (-) 450 WP_003103132.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  K7G42_RS09610 (K7G42_09540) - 1811988..1813448 (-) 1461 WP_003104259.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26876.31 Da        Isoelectric Point: 5.6444

>NTDB_id=602218 K7G42_RS09580 WP_003105648.1 1807903..1808628(-) (pptA) [Streptococcus parauberis strain KRS02083]
MLKIENLTGGYINIPVLKDISFSVDAGQLVGLIGLNGAGKSTTINEIIGLLRPYKGSITIDGISLIDDKTAYRKKIGFIP
ETPSLYEELTLAEHIETIAMAYDIPVKEAHDRAKPLLKTYRLEDKLDWYPVHFSKGMKQKVMIICAFIIDPRLFILDEPF
LGLDPLAIADLIAYLDEEKKKGKSILMSTHVLDSAEKMCDRFVILHHGQIRAQGTLDDLRTAFGDNQASLNDIYLALTKE
A

Nucleotide


Download         Length: 726 bp        

>NTDB_id=602218 K7G42_RS09580 WP_003105648.1 1807903..1808628(-) (pptA) [Streptococcus parauberis strain KRS02083]
ATGTTAAAAATTGAAAATCTGACAGGTGGTTATATTAATATCCCTGTTTTGAAGGACATTTCTTTTTCCGTTGATGCTGG
TCAATTAGTAGGATTAATTGGTTTGAATGGTGCAGGAAAATCAACGACAATCAATGAAATAATTGGTTTGTTAAGACCTT
ATAAAGGTAGCATTACCATTGATGGCATCTCCTTGATAGATGACAAAACAGCCTACAGGAAGAAAATTGGCTTTATACCC
GAAACACCAAGTCTTTACGAAGAATTGACCTTGGCTGAACACATTGAAACAATTGCCATGGCTTACGACATTCCAGTAAA
AGAAGCACATGATCGAGCAAAACCTTTATTGAAAACATATCGTTTGGAGGATAAATTGGATTGGTATCCCGTTCATTTTT
CTAAAGGAATGAAACAAAAAGTAATGATTATCTGTGCTTTTATTATTGATCCTAGGTTATTTATTCTAGATGAACCATTC
CTTGGCTTAGATCCGTTAGCAATTGCTGACTTAATTGCCTATTTGGACGAGGAAAAAAAGAAAGGCAAGTCAATTTTGAT
GAGTACACACGTTCTCGATTCTGCAGAAAAAATGTGTGATCGGTTTGTCATTTTACATCATGGACAAATCCGTGCCCAAG
GGACTTTGGACGATTTACGAACTGCATTTGGTGATAACCAGGCTAGTCTAAATGATATATACTTAGCCTTGACCAAAGAG
GCTTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0E2UCE4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus thermophilus LMD-9

73.222

99.17

0.726
  pptA Streptococcus salivarius strain HSISS4

72.803

99.17

0.722