Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   K7G42_RS08615 Genome accession   NZ_CP082783
Coordinates   1615093..1616130 (-) Length   345 a.a.
NCBI ID   WP_003106043.1    Uniprot ID   A0A0E2UF26
Organism   Streptococcus parauberis strain KRS02083     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1610093..1621130
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K7G42_RS08590 (K7G42_08530) rbsC 1610143..1611093 (-) 951 WP_003105746.1 ribose ABC transporter permease -
  K7G42_RS08595 (K7G42_08535) - 1611095..1612573 (-) 1479 WP_003108161.1 sugar ABC transporter ATP-binding protein -
  K7G42_RS08600 (K7G42_08540) rbsD 1612585..1612983 (-) 399 WP_003102489.1 D-ribose pyranase -
  K7G42_RS08605 (K7G42_08545) rbsK 1612958..1613869 (-) 912 WP_003108158.1 ribokinase -
  K7G42_RS08610 (K7G42_08550) - 1613871..1614845 (-) 975 WP_003108157.1 LacI family DNA-binding transcriptional regulator -
  K7G42_RS08615 (K7G42_08555) sepM 1615093..1616130 (-) 1038 WP_003106043.1 SepM family pheromone-processing serine protease Regulator
  K7G42_RS08620 (K7G42_08560) coaD 1616117..1616608 (-) 492 WP_003103109.1 pantetheine-phosphate adenylyltransferase -
  K7G42_RS08625 (K7G42_08565) rsmD 1616598..1617137 (-) 540 WP_003108156.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  K7G42_RS08630 (K7G42_08570) asnA 1617224..1618216 (-) 993 WP_003105278.1 aspartate--ammonia ligase -
  K7G42_RS08635 (K7G42_08575) arcC 1618384..1619334 (-) 951 WP_003103897.1 carbamate kinase -
  K7G42_RS08640 (K7G42_08580) - 1619358..1620689 (-) 1332 WP_003105780.1 dipeptidase -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37520.30 Da        Isoelectric Point: 9.9732

>NTDB_id=602214 K7G42_RS08615 WP_003106043.1 1615093..1616130(-) (sepM) [Streptococcus parauberis strain KRS02083]
MKKNNKLKIWLLGIIAVIAIGFSLFYPLPYYIEMPGGAYDIRSVLKVNEQKDKEKGSYNFVAVSISHATFAQILYAWATP
FTEISSAEATTGGYSDADYMRINQFYMETSQNGAVYQALKKAGKPVSLDYLGVYVLDVSKNSSLKGVLNIADTVTSVNQK
HFKSSADLIKFVSAMKLGDKVSVQYTSNGKDKSANGKIIKLKNGKNGIGISLTDHTKVHTKEKIDFTTEGVGGPSAGLMF
TLDILDQINKEDLRKGRNIAGTGTIDQEGKVGDIGGAGLKVVAAAKEGAEIFFVPNNPVDPRVKKVDPKAITNYKEALEA
AKQLKTKMKIVPVKTVDDAISYLKK

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=602214 K7G42_RS08615 WP_003106043.1 1615093..1616130(-) (sepM) [Streptococcus parauberis strain KRS02083]
ATGAAGAAAAATAATAAATTAAAAATCTGGTTATTGGGCATTATTGCTGTCATTGCAATTGGTTTTTCACTATTTTATCC
TCTACCTTATTATATTGAAATGCCTGGTGGTGCCTATGATATCCGTAGTGTCCTTAAGGTAAATGAACAAAAAGACAAGG
AAAAAGGGTCTTATAATTTTGTTGCTGTAAGTATTAGTCATGCGACATTTGCACAAATTCTCTATGCTTGGGCAACACCA
TTTACAGAGATTTCATCAGCAGAAGCAACTACTGGTGGCTATAGTGATGCAGACTACATGAGAATTAATCAATTCTATAT
GGAAACTTCACAAAATGGTGCTGTTTATCAAGCTCTCAAAAAAGCTGGTAAACCTGTTTCCCTTGACTACTTAGGTGTTT
ATGTTCTTGATGTCAGTAAAAATTCTTCTCTTAAAGGGGTTTTGAATATTGCTGATACAGTTACAAGTGTTAATCAAAAA
CACTTTAAGAGTTCAGCTGATTTGATTAAGTTTGTGTCTGCCATGAAGTTGGGGGATAAAGTCAGTGTCCAATATACCAG
TAATGGTAAAGATAAATCAGCCAATGGTAAAATTATTAAGTTGAAAAATGGTAAAAATGGGATTGGAATCAGCTTAACTG
ACCATACCAAAGTACACACTAAAGAAAAAATTGATTTTACAACTGAAGGCGTTGGTGGTCCAAGTGCTGGTTTGATGTTC
ACCCTTGATATTCTTGACCAAATCAATAAAGAAGATTTACGTAAGGGGCGTAATATTGCTGGTACTGGTACAATTGACCA
AGAAGGTAAAGTTGGTGATATTGGTGGTGCAGGCTTAAAAGTAGTTGCGGCTGCTAAAGAAGGGGCAGAGATTTTCTTCG
TTCCTAATAATCCAGTTGATCCGCGTGTCAAAAAAGTTGATCCAAAAGCAATAACTAATTATAAAGAAGCCTTAGAAGCT
GCTAAGCAATTAAAAACAAAAATGAAGATTGTTCCAGTCAAGACAGTCGATGACGCAATCAGTTATCTGAAAAAGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0E2UF26

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

68.986

100

0.69