Detailed information NTG0602145

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: DVS74_RS03730
• Genome accession: NZ_CP099516
• Coordinates: 862263..863456 (+)
• Length: 397 a.a.
• NCBI ID: WP_004085429.1
• Uniprot ID: -
• Organism: Xylella fastidiosa subsp. multiplex strain ESVL
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 857263..868456

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DVS74_RS03710 (DVS74_003685)	-	857448..858650 (-)	1203	WP_004085433.1	anthranilate synthase component I family protein	-
DVS74_RS03715 (DVS74_003690)	-	859285..860091 (+)	807	WP_004085432.1	TatD family hydrolase	-
DVS74_RS03720 (DVS74_003695)	-	860287..860901 (-)	615	WP_004085431.1	HNH endonuclease	-
DVS74_RS03725 (DVS74_003700)	-	861217..861690 (-)	474	WP_004085430.1	LEA type 2 family protein	-
DVS74_RS03730 (DVS74_003705)	pilA	862263..863456 (+)	1194	WP_004085429.1	signal recognition particle-docking protein FtsY	Machinery gene
DVS74_RS03735 (DVS74_003710)	mutY	863556..864605 (+)	1050	WP_004085428.1	A/G-specific adenine glycosylase	-
DVS74_RS03740 (DVS74_003715)	-	864640..864912 (+)	273	WP_011097829.1	oxidative damage protection protein	-
DVS74_RS03745 (DVS74_003720)	-	864966..865499 (+)	534	WP_228762585.1	DUF2726 domain-containing protein	-
DVS74_RS03750 (DVS74_003725)	-	865629..866363 (+)	735	WP_004085427.1	YebC/PmpR family DNA-binding transcriptional regulator	-
DVS74_RS03755 (DVS74_003730)	ruvC	866473..866994 (+)	522	WP_027700721.1	crossover junction endodeoxyribonuclease RuvC	-
DVS74_RS03760 (DVS74_003735)	ruvA	867080..867664 (+)	585	WP_004085425.1	Holliday junction branch migration protein RuvA	-

Sequence

Protein

• Length: 397 a.a.
• Molecular weight: 42764.87 Da
• Isoelectric Point: 6.7732

>NTDB_id=602145 DVS74_RS03730 WP_004085429.1 862263..863456(+) (pilA) [Xylella fastidiosa subsp. multiplex strain ESVL]
MLSFLRLKKPTNAISDNERSKYSAEEMAAAFPKAPSLDEAPDQEQTSTTPLLSSADQPALLTHSTSSAFTELAISTGDDT
SGASTPTVSVDKPNWRERLRGSLFARNINALFSNNPRLDENLLDEIETALITADVGVSTTNAIVDGLRKRMKAREFADIQ
TLLAALRNELITILRPVSKPLIVKRDALPFVFLVVGVNGVGKTTTIGKLAKWFKRDGYSLMLAAGDTFRAAAVAQLQAWG
ERNSITVIAQKGPNADAASVVYDALQAAKARSTEVLIADTAGRLHTQIGLMNELSKIRRVLGKLDSTAPHEVLMVIDGTT
GQNALSQLRQFHAAVNVTGLVVTKLDGTAKGGVVFTLAREFGIPIHFISIGEQLEDMHFFDPEAFVDALLPKTLGNA

Nucleotide

• Length: 1194 bp

>NTDB_id=602145 DVS74_RS03730 WP_004085429.1 862263..863456(+) (pilA) [Xylella fastidiosa subsp. multiplex strain ESVL]
ATGTTAAGCTTTCTACGCCTCAAGAAGCCCACCAATGCCATCAGCGACAACGAGCGGAGCAAATACAGTGCTGAAGAGAT
GGCGGCTGCCTTTCCAAAAGCTCCTTCGTTGGATGAGGCTCCAGACCAAGAGCAAACTAGCACCACGCCATTGCTATCTT
CAGCAGATCAGCCTGCGTTACTGACCCACTCTACGAGTAGTGCCTTTACAGAGCTAGCAATCTCCACTGGCGACGACACA
TCGGGGGCGAGTACCCCAACTGTTTCGGTGGATAAACCCAATTGGCGTGAGCGCCTACGTGGCAGTCTCTTCGCGCGGAA
CATCAATGCTTTATTCTCGAATAACCCGCGTTTGGATGAAAATCTGCTTGATGAGATTGAAACCGCGTTGATTACGGCTG
ATGTAGGCGTGTCTACGACTAATGCCATAGTTGACGGTTTGCGTAAACGTATGAAAGCACGTGAATTCGCTGATATCCAA
ACACTGTTAGCTGCATTACGTAATGAATTAATCACGATACTGCGTCCTGTTTCTAAACCACTGATCGTCAAACGCGATGC
ACTTCCATTTGTGTTTCTTGTTGTAGGTGTCAATGGTGTTGGTAAGACCACAACAATCGGCAAGTTGGCGAAGTGGTTCA
AGAGGGATGGCTACAGCTTGATGTTGGCTGCCGGTGATACCTTCCGTGCTGCCGCTGTCGCGCAGTTACAGGCATGGGGC
GAGCGTAATAGTATTACGGTGATCGCACAAAAAGGACCGAATGCAGATGCTGCTTCGGTAGTCTATGATGCGCTGCAAGC
AGCCAAGGCGCGTAGCACCGAGGTGCTCATCGCCGATACCGCAGGCCGCCTGCATACCCAGATTGGTTTAATGAACGAGT
TGAGCAAAATCCGCCGTGTGCTCGGTAAGCTTGATAGCACCGCACCACATGAAGTACTGATGGTGATTGACGGTACTACT
GGGCAAAATGCGCTTTCGCAATTACGCCAATTTCATGCTGCCGTGAACGTCACTGGTCTTGTGGTAACCAAGCTCGATGG
CACTGCCAAGGGCGGGGTAGTCTTCACGTTGGCACGTGAATTTGGCATTCCAATCCACTTCATCAGCATAGGCGAGCAGC
TGGAAGATATGCATTTTTTTGACCCTGAGGCATTCGTAGACGCGCTACTGCCAAAAACATTAGGAAATGCTTAA

Domains

Predicted by InterProScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (105-170)

• SRP54-type protein, GTPase domain (SRP54) (189-390)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	42.297	89.924	0.38