Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   LPT20_RS07285 Genome accession   NZ_CP099504
Coordinates   1536832..1537632 (-) Length   266 a.a.
NCBI ID   WP_000088649.1    Uniprot ID   A0A7U7JRT9
Organism   Staphylococcus aureus strain S36     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1531832..1542632
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LPT20_RS07265 (LPT20_07265) - 1531839..1532702 (-) 864 WP_000680580.1 hypothetical protein -
  LPT20_RS07270 (LPT20_07270) - 1532901..1533206 (-) 306 WP_000677988.1 hypothetical protein -
  LPT20_RS07275 (LPT20_07275) rlmH 1533452..1533931 (-) 480 WP_000704775.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  LPT20_RS07280 (LPT20_07280) adsA 1534299..1536605 (-) 2307 WP_000645768.1 LPXTG-anchored adenosine synthase AdsA -
  LPT20_RS07285 (LPT20_07285) vicX 1536832..1537632 (-) 801 WP_000088649.1 MBL fold metallo-hydrolase Regulator
  LPT20_RS07290 (LPT20_07290) yycI 1538020..1538808 (-) 789 WP_001104161.1 two-component system regulatory protein YycI -
  LPT20_RS07295 (LPT20_07295) yycH 1538809..1540143 (-) 1335 WP_001060149.1 two-component system activity regulator YycH -
  LPT20_RS07300 (LPT20_07300) walK 1540136..1541962 (-) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30313.52 Da        Isoelectric Point: 6.3392

>NTDB_id=601908 LPT20_RS07285 WP_000088649.1 1536832..1537632(-) (vicX) [Staphylococcus aureus strain S36]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=601908 LPT20_RS07285 WP_000088649.1 1536832..1537632(-) (vicX) [Staphylococcus aureus strain S36]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACAAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAATGTGTCACATGATGCAATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTGACAGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGTCATGTATCTAATGAGGATGCGGGTCATGCGATGACAGACGTGATTACAGGTAACACGA
AACGTATTTACTTATCGCATTTATCACAAGATAATAACATGAAAGATTTGGCGCGTATGAGTGTTGGCCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7JRT9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.027

96.617

0.474