Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   K7T73_RS05390 Genome accession   NZ_CP082363
Coordinates   1068075..1068536 (-) Length   153 a.a.
NCBI ID   WP_063383422.1    Uniprot ID   -
Organism   Bacillus badius strain NBPM-293     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1063075..1073536
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K7T73_RS05370 (K7T73_05360) - 1063723..1064580 (+) 858 WP_063383418.1 NAD(P)-dependent oxidoreductase -
  K7T73_RS05375 (K7T73_05365) - 1064634..1065791 (-) 1158 WP_063383419.1 aminotransferase A -
  K7T73_RS05380 (K7T73_05370) corA 1065884..1066864 (+) 981 WP_063383420.1 magnesium/cobalt transporter CorA -
  K7T73_RS05385 (K7T73_05375) - 1066964..1067866 (+) 903 WP_063383421.1 chemotaxis protein -
  K7T73_RS05390 (K7T73_05380) kre 1068075..1068536 (-) 462 WP_063383422.1 YkyB family protein Regulator
  K7T73_RS05395 (K7T73_05385) - 1068728..1069606 (-) 879 WP_063383423.1 metallophosphoesterase -
  K7T73_RS05400 (K7T73_05390) - 1069810..1070052 (-) 243 WP_041099675.1 glutaredoxin family protein -
  K7T73_RS05405 (K7T73_05395) - 1070225..1070476 (+) 252 WP_041099677.1 YkuJ family protein -
  K7T73_RS05410 (K7T73_05400) cbpB 1070648..1071088 (+) 441 WP_041099679.1 cyclic-di-AMP-binding protein CbpB -
  K7T73_RS05415 (K7T73_05405) - 1071208..1072701 (+) 1494 WP_223663089.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17566.25 Da        Isoelectric Point: 10.4683

>NTDB_id=601817 K7T73_RS05390 WP_063383422.1 1068075..1068536(-) (kre) [Bacillus badius strain NBPM-293]
MNAYKESPAHSPSTSNLAKAIFTVNRHAKTATNPKYLYLLKKKALLKMIQEGRAEKTGLHFSNNPKNSQQQSDVLVVCGE
YTFHIPPCKEDFSTLPHFGSLDKKRRNPKTYMNLTEAKRMLQLYTGFIEKDDSSPPRKKQYRKPVFKPLGQSY

Nucleotide


Download         Length: 462 bp        

>NTDB_id=601817 K7T73_RS05390 WP_063383422.1 1068075..1068536(-) (kre) [Bacillus badius strain NBPM-293]
TTGAATGCTTATAAAGAATCTCCTGCCCATTCTCCATCTACTTCTAACCTCGCCAAAGCAATCTTTACTGTCAACCGGCA
CGCTAAGACGGCTACAAACCCTAAATATTTGTATTTACTGAAGAAAAAAGCACTCTTGAAAATGATACAGGAAGGACGGG
CAGAGAAAACCGGCCTTCACTTTTCCAATAATCCGAAGAACAGTCAGCAGCAGTCAGACGTTCTTGTCGTATGCGGTGAG
TATACGTTTCATATTCCGCCTTGCAAAGAAGATTTTTCCACCCTTCCCCACTTCGGAAGTCTGGATAAAAAAAGGCGCAA
TCCGAAAACTTATATGAATTTGACAGAAGCAAAGAGAATGTTGCAATTATATACCGGTTTTATCGAAAAGGATGACTCTT
CTCCTCCTCGAAAAAAACAGTACCGCAAACCGGTGTTTAAGCCGCTCGGCCAGTCTTACTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-126)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

59.859

92.81

0.556