Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   K7T73_RS04035 Genome accession   NZ_CP082363
Coordinates   780667..780858 (+) Length   63 a.a.
NCBI ID   WP_041099204.1    Uniprot ID   -
Organism   Bacillus badius strain NBPM-293     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 775667..785858
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K7T73_RS04020 (K7T73_04015) clpB 776652..779249 (+) 2598 WP_223662850.1 ATP-dependent chaperone ClpB -
  K7T73_RS04025 (K7T73_04020) - 779318..779500 (-) 183 WP_063383963.1 YjzD family protein -
  K7T73_RS04030 (K7T73_04025) med 779693..780664 (+) 972 WP_063383920.1 BMP family ABC transporter substrate-binding protein Regulator
  K7T73_RS04035 (K7T73_04030) comZ 780667..780858 (+) 192 WP_041099204.1 ComZ family protein Regulator
  K7T73_RS04040 (K7T73_04035) - 781022..781954 (+) 933 WP_041099206.1 beta-ketoacyl-ACP synthase III -
  K7T73_RS04045 (K7T73_04040) fabF 781995..783239 (+) 1245 WP_063383922.1 beta-ketoacyl-ACP synthase II -
  K7T73_RS04050 (K7T73_04045) - 783401..783607 (+) 207 WP_041099210.1 hypothetical protein -
  K7T73_RS04055 (K7T73_04050) - 783693..784457 (+) 765 WP_041099212.1 YjbA family protein -
  K7T73_RS04060 (K7T73_04055) trpS 784509..785498 (-) 990 WP_041114071.1 tryptophan--tRNA ligase -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7314.31 Da        Isoelectric Point: 3.9488

>NTDB_id=601811 K7T73_RS04035 WP_041099204.1 780667..780858(+) (comZ) [Bacillus badius strain NBPM-293]
MNENKNMEFVQIAMKYLPEAQEKLKEAGIDFSVDLIEPFMGLFLNVMNEAYELGKQDAQQENQ

Nucleotide


Download         Length: 192 bp        

>NTDB_id=601811 K7T73_RS04035 WP_041099204.1 780667..780858(+) (comZ) [Bacillus badius strain NBPM-293]
ATGAACGAAAACAAAAACATGGAATTTGTTCAAATTGCGATGAAATATTTGCCGGAAGCACAGGAAAAATTAAAAGAAGC
AGGAATTGACTTTTCTGTAGATTTAATAGAGCCATTTATGGGGCTGTTTTTAAATGTTATGAATGAGGCCTATGAACTGG
GTAAACAAGATGCTCAGCAAGAGAATCAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

58.73

100

0.587