Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   K7H07_RS04635 Genome accession   NZ_CP082336
Coordinates   974197..975240 (+) Length   347 a.a.
NCBI ID   WP_002509180.1    Uniprot ID   A0A7V7SQH4
Organism   Staphylococcus arlettae strain AHKW2e     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 969197..980240
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K7H07_RS04610 (K7H07_04610) - 969877..970602 (+) 726 WP_222985253.1 type 1 glutamine amidotransferase -
  K7H07_RS04615 (K7H07_04615) - 971089..972075 (-) 987 WP_103388397.1 FUSC family protein -
  K7H07_RS04620 (K7H07_04620) map 972241..972993 (+) 753 WP_021459027.1 type I methionyl aminopeptidase -
  K7H07_RS04625 (K7H07_04625) - 973096..973482 (+) 387 WP_002509178.1 hypothetical protein -
  K7H07_RS04630 (K7H07_04630) liaF 973499..974200 (+) 702 WP_002509179.1 cell wall-active antibiotics response protein LiaF -
  K7H07_RS04635 (K7H07_04635) vraS 974197..975240 (+) 1044 WP_002509180.1 sensor histidine kinase Regulator
  K7H07_RS04640 (K7H07_04640) vraR 975230..975859 (+) 630 WP_002509181.1 response regulator transcription factor Regulator
  K7H07_RS04645 (K7H07_04645) - 975920..976999 (-) 1080 WP_021459026.1 YihY/virulence factor BrkB family protein -
  K7H07_RS04650 (K7H07_04650) - 977279..977563 (-) 285 WP_002509183.1 hypothetical protein -
  K7H07_RS04655 (K7H07_04655) - 977570..978034 (-) 465 WP_002509184.1 low molecular weight protein-tyrosine-phosphatase -
  K7H07_RS04660 (K7H07_04660) - 978170..978373 (+) 204 WP_021459025.1 DUF1128 family protein -
  K7H07_RS04665 (K7H07_04665) - 978385..979623 (+) 1239 WP_021459024.1 aminopeptidase -
  K7H07_RS04670 (K7H07_04670) - 979657..980184 (+) 528 Protein_921 acyl-CoA thioesterase -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 39859.16 Da        Isoelectric Point: 5.2631

>NTDB_id=601574 K7H07_RS04635 WP_002509180.1 974197..975240(+) (vraS) [Staphylococcus arlettae strain AHKW2e]
MNHYIRAIGSMLILVYSTLIAFFFIDKIFVNIMYFQGMFYTQIFGIPVFLFLNLLIILLCIIVGSVLAYKINQQNHWLQT
QIERSIEGETVGINDQDIELYNETIELYQTLVPLNQEVHKLRMKTQNLTNESYNLNDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKESQLTPPLDQQIPTLEKMVQDSQLEMRALLLHLRPIGLKDKSLGEGIKDLVVDLQKKVPMKVIHDI
EDFTVPKGIEDHLFRITQEAISNTLRHSNGTKVTIELFNQEAYLLLRIQDNGIGFNVDDKAEQSYGLKNMRERALEIGAT
FHIVSLPDSGTRIEVKAPLDKEDIDAN

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=601574 K7H07_RS04635 WP_002509180.1 974197..975240(+) (vraS) [Staphylococcus arlettae strain AHKW2e]
ATGAATCACTACATTAGAGCAATAGGCTCTATGCTAATATTAGTATATAGTACATTAATTGCTTTTTTCTTTATAGATAA
AATATTTGTAAATATTATGTATTTTCAAGGTATGTTTTATACCCAAATATTTGGTATTCCAGTATTTTTATTTTTAAATT
TGCTCATAATTTTATTATGTATCATTGTAGGATCGGTTTTAGCTTATAAAATAAACCAGCAAAACCATTGGCTACAAACA
CAAATTGAACGTTCAATTGAAGGAGAAACAGTAGGGATTAATGACCAAGATATAGAACTTTATAATGAAACTATAGAGCT
CTATCAAACGTTAGTTCCACTCAATCAAGAAGTACATAAACTGCGAATGAAGACCCAAAATTTAACAAATGAATCTTATA
ATTTAAACGATGTCAAAGTTAAAAAAATAATCGAAGATGAACGACAAAGATTGGCTAGGGAATTACATGATTCAGTGAGT
CAGCAACTTTTTGCAGCTAGCATGATGTTATCAGCTATCAAAGAATCTCAATTAACACCACCTTTAGATCAACAAATCCC
TACATTAGAAAAAATGGTACAAGATTCTCAACTAGAAATGAGAGCATTATTACTACATTTAAGACCAATTGGTTTAAAAG
ATAAGTCTCTCGGAGAAGGTATTAAAGATTTAGTTGTCGATTTACAGAAAAAAGTACCAATGAAGGTCATACATGACATT
GAAGATTTTACTGTACCTAAAGGTATTGAAGATCATTTGTTTCGTATTACGCAAGAAGCGATATCCAATACATTACGTCA
TTCCAACGGTACAAAAGTAACAATTGAATTATTTAATCAAGAAGCATATTTATTATTACGTATTCAAGATAACGGTATTG
GTTTTAACGTAGATGATAAAGCTGAACAAAGTTATGGATTGAAAAATATGCGGGAGCGTGCATTAGAAATAGGTGCCACA
TTCCATATTGTATCGCTGCCTGATTCAGGTACTAGAATAGAAGTGAAAGCACCATTAGATAAGGAGGATATAGATGCCAA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A7V7SQH4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

88.63

98.847

0.876