Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   K7G97_RS11450 Genome accession   NZ_CP082333
Coordinates   2178798..2180600 (-) Length   600 a.a.
NCBI ID   WP_223040616.1    Uniprot ID   -
Organism   Exiguobacterium acetylicum strain EYLC1     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 2173798..2185600
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K7G97_RS11425 (K7G97_11425) - 2174653..2175537 (-) 885 WP_223040615.1 RluA family pseudouridine synthase -
  K7G97_RS11430 (K7G97_11430) - 2175556..2176359 (-) 804 WP_023468882.1 NAD kinase -
  K7G97_RS11435 (K7G97_11435) - 2176370..2177014 (-) 645 WP_035396676.1 GTP pyrophosphokinase family protein -
  K7G97_RS11440 (K7G97_11440) - 2177132..2177692 (+) 561 WP_262415743.1 CYTH domain-containing protein -
  K7G97_RS11445 (K7G97_11445) - 2177787..2178578 (+) 792 WP_029342209.1 DsbA family protein -
  K7G97_RS11450 (K7G97_11450) pepF 2178798..2180600 (-) 1803 WP_223040616.1 oligoendopeptidase F Regulator
  K7G97_RS11455 (K7G97_11455) - 2180665..2181615 (-) 951 WP_223040617.1 competence protein CoiA family protein -
  K7G97_RS11460 (K7G97_11460) cls 2181634..2183145 (-) 1512 WP_223040618.1 cardiolipin synthase -
  K7G97_RS11465 (K7G97_11465) - 2183214..2183936 (+) 723 WP_223040619.1 SDR family NAD(P)-dependent oxidoreductase -
  K7G97_RS11470 (K7G97_11470) mecA 2183999..2184625 (-) 627 WP_023468889.1 adaptor protein MecA -
  K7G97_RS11475 (K7G97_11475) spxA 2184797..2185195 (-) 399 WP_012370920.1 transcriptional regulator SpxA -
  K7G97_RS11480 (K7G97_11480) - 2185368..2185505 (-) 138 WP_023468890.1 hypothetical protein -

Sequence

Protein


Download         Length: 600 a.a.        Molecular weight: 68346.67 Da        Isoelectric Point: 4.5563

>NTDB_id=601553 K7G97_RS11450 WP_223040616.1 2178798..2180600(-) (pepF) [Exiguobacterium acetylicum strain EYLC1]
MAEVLTRQDVDVTETWNLESIYATNEAWEEEFESVKAMLPLLVEYKGRLGQSAETLYEGLQLRDEVSRRLYKLYTYAHMR
YDENTADSFYQAMNDRARTLASQIGATLAFMTPELLAVPESTIETYLNENPDLAMYRHAFDELNQEREHVLTEAEEAILA
KAGEVLGQSGTTFGMLNNADLTFPKIKGEDGEETELTHGRFITFLESSDRSVREAAFKAMYGTYAKYTNTLASTLAGSVK
KDNFYADVRKFPSARAAALHGNAIPESVYDGLVEAVHEHLPLLHRYVALRKRVLGLDELHVYDMYTPLVSEVEMKVSYEE
AKQLMVEGLAPLGAEYKHILEEGLSERWVDVRETRGKRSGAYSSGAYDTQPFILMNWQDNINNLFTLAHEFGHSVHSYYT
RKSQPYPYGDYSIFVAEVASTTNEALLNDYLLKKVTDRKEKLYLLNNQLETFRGTLFRQTMFAEFEHAIHDAARLGQSLT
PEFLTSTYYALNQKYFGDEIVLDEEIGLEWARIPHFYYNYYVYQYATGISAAAALTDQILEEGQPAVERYINNFLKAGSS
DYPIEVLKAAGVDMTTKAPVEAALRQFERVLDEFEALLAE

Nucleotide


Download         Length: 1803 bp        

>NTDB_id=601553 K7G97_RS11450 WP_223040616.1 2178798..2180600(-) (pepF) [Exiguobacterium acetylicum strain EYLC1]
ATGGCAGAAGTATTAACACGTCAAGATGTTGACGTTACAGAAACATGGAATCTAGAGTCGATTTACGCAACGAACGAAGC
GTGGGAAGAAGAATTCGAATCGGTGAAAGCGATGCTTCCATTACTCGTCGAGTATAAGGGGCGTCTTGGACAGAGTGCAG
AAACACTCTATGAAGGGTTACAGTTACGCGACGAAGTCTCAAGACGCCTTTATAAGCTTTATACATACGCGCACATGCGT
TATGACGAAAATACAGCAGACAGCTTCTACCAAGCTATGAATGACCGTGCTCGAACGCTCGCGTCGCAAATCGGAGCAAC
GCTTGCTTTCATGACACCAGAATTGTTAGCTGTACCTGAGTCAACGATTGAGACGTATCTTAATGAGAATCCAGATCTTG
CGATGTATCGTCATGCATTTGATGAATTGAATCAAGAGCGTGAACACGTCCTGACGGAAGCGGAAGAAGCGATTCTTGCA
AAGGCAGGAGAAGTACTCGGTCAATCCGGTACGACGTTCGGTATGTTGAACAATGCAGATCTGACATTCCCGAAAATCAA
AGGGGAAGACGGAGAAGAGACAGAGTTGACACATGGTCGCTTCATCACATTCCTGGAATCATCTGATCGTTCGGTCCGTG
AAGCCGCATTTAAAGCGATGTATGGAACATATGCAAAATACACGAATACGCTCGCTTCAACACTTGCTGGGTCAGTTAAG
AAAGACAACTTCTATGCGGATGTCCGGAAGTTCCCATCGGCACGCGCAGCAGCTTTACATGGTAATGCGATTCCTGAGTC
CGTCTATGATGGATTAGTTGAAGCGGTACATGAGCATTTACCATTGCTTCATCGTTACGTTGCCCTACGTAAGCGAGTGC
TCGGACTCGATGAACTACACGTGTATGATATGTACACACCGCTCGTTTCTGAAGTGGAGATGAAAGTCTCTTACGAGGAA
GCGAAACAATTGATGGTGGAAGGGCTCGCACCGCTCGGAGCAGAGTACAAGCATATCCTCGAAGAAGGGTTGTCTGAACG
TTGGGTTGATGTCCGGGAGACGCGTGGTAAACGGAGTGGAGCTTACTCTTCTGGAGCTTATGATACACAGCCGTTCATTT
TGATGAACTGGCAAGACAACATCAACAACCTCTTTACACTCGCACATGAATTCGGACATTCCGTCCATAGTTATTACACG
CGGAAGTCTCAACCATATCCATACGGTGACTATTCAATCTTCGTCGCAGAAGTCGCTTCAACGACGAATGAAGCATTATT
GAACGACTATCTATTGAAGAAAGTGACGGATCGTAAAGAGAAACTCTATCTATTAAACAATCAACTCGAAACATTCCGCG
GAACATTGTTCCGACAAACGATGTTCGCCGAGTTCGAACATGCAATTCATGATGCGGCACGTCTTGGACAATCGCTGACA
CCGGAATTCTTAACGTCAACGTATTATGCGTTGAATCAAAAATACTTCGGAGACGAAATTGTATTAGATGAAGAAATCGG
TCTAGAATGGGCTCGGATTCCACACTTCTATTACAATTATTATGTCTATCAGTATGCAACGGGCATTTCTGCTGCCGCTG
CTTTGACGGATCAGATTCTAGAAGAAGGACAACCTGCTGTAGAGCGATACATTAACAATTTCTTAAAAGCGGGATCAAGT
GATTATCCAATCGAAGTATTAAAAGCTGCGGGTGTCGATATGACGACAAAAGCGCCAGTTGAAGCAGCATTGCGTCAATT
TGAACGTGTCCTAGATGAATTTGAAGCTTTGTTAGCAGAGTGA

Domains

Predicted by InterproScan.

Oligopeptidase F (Peptidase_M3_N)

(114-183)

Peptidase family M3 (Peptidase_M3)

(204-585)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

49.829

97.333

0.485