Detailed information NTG0601480

Bioinformatically predicted

Overview

• Name: sepM
• Type: Regulator
• Locus tag: NC516_RS05835
• Genome accession: NZ_CP099485
• Coordinates: 1158647..1159693 (-)
• Length: 348 a.a.
• NCBI ID: WP_061826983.1
• Uniprot ID: -
• Organism: Latilactobacillus sakei strain WiKim0095
• Function: processing of CSP (predicted from homology) Competence regulation

Genomic Context

Location: 1153647..1164693

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NC516_RS05810 (NC516_05810)	rpsT	1153708..1153962 (+)	255	WP_011374767.1	30S ribosomal protein S20	-
NC516_RS05815 (NC516_05815)	holA	1154031..1155059 (-)	1029	WP_061826985.1	DNA polymerase III subunit delta	-
NC516_RS05820 (NC516_05820)	comEC	1155056..1157122 (-)	2067	WP_226474266.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
NC516_RS05825 (NC516_05825)	-	1157320..1157808 (-)	489	WP_011374770.1	ComE operon protein 2	-
NC516_RS05830 (NC516_05830)	comEA	1157866..1158573 (-)	708	WP_226474265.1	helix-hairpin-helix domain-containing protein	Machinery gene
NC516_RS05835 (NC516_05835)	sepM	1158647..1159693 (-)	1047	WP_061826983.1	SepM family pheromone-processing serine protease	Regulator
NC516_RS05840 (NC516_05840)	coaD	1159695..1160192 (-)	498	WP_061826982.1	pantetheine-phosphate adenylyltransferase	-
NC516_RS05845 (NC516_05845)	rsmD	1160205..1160759 (-)	555	WP_011374774.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
NC516_RS05850 (NC516_05850)	-	1160764..1161054 (-)	291	WP_011374775.1	YlbG family protein	-
NC516_RS05855 (NC516_05855)	-	1161078..1162166 (-)	1089	WP_061826981.1	CAP-associated domain-containing protein	-
NC516_RS05860 (NC516_05860)	-	1162177..1163364 (-)	1188	WP_011374777.1	FtsW/RodA/SpoVE family cell cycle protein	-
NC516_RS05865 (NC516_05865)	-	1163373..1163669 (-)	297	WP_016265221.1	DUF1507 family protein	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 38160.00 Da
• Isoelectric Point: 9.6893

>NTDB_id=601480 NC516_RS05835 WP_061826983.1 1158647..1159693(-) (sepM) [Latilactobacillus sakei strain WiKim0095]
MPKNKKLTKRLIVIVVLIIVAVVCLMPTGYYIEGAGTAENTSQYVKVDGKHDHQKGHFMLTTVGVRGPVTPLQLLLSKTQ
PFTEIESRDELMGNEDTEAYEQIQKYYMDSSINAAVEAAYKKADKAYNTKYLGVYVMSMLGNSTFKDDLAVGDTITAIDH
HQFKNANAFVKYVQGLKVGQKVTVSYDHGQKHQTATHRLIKLLRTHHPGLGITLTDHSKIETDIPVKIDAGDIGGPSAGL
MFTLQVYNQLTKQNLQKGRKIAGTGTMAADGTVGAIGGIDKKVLVASQEGATVFFAPNDPVTKAILKVDPDYQNNYTIAK
NAAKKIHTKMKIVPVKTLDDALTYLKNH

Nucleotide

• Length: 1047 bp

>NTDB_id=601480 NC516_RS05835 WP_061826983.1 1158647..1159693(-) (sepM) [Latilactobacillus sakei strain WiKim0095]
ATGCCAAAAAATAAGAAACTGACAAAACGATTAATTGTAATTGTGGTTTTAATCATTGTTGCAGTTGTTTGTTTAATGCC
CACTGGCTATTATATTGAAGGTGCCGGGACCGCAGAAAATACCAGCCAATATGTTAAGGTCGACGGTAAACATGATCATC
AAAAAGGCCATTTTATGCTGACAACTGTTGGTGTCAGAGGTCCAGTAACACCGTTGCAATTATTATTGTCCAAGACGCAA
CCTTTTACGGAAATTGAAAGTCGTGACGAATTGATGGGCAATGAAGATACCGAAGCTTACGAACAGATTCAAAAGTACTA
TATGGATAGTTCAATTAACGCTGCCGTTGAAGCCGCCTATAAAAAAGCTGATAAGGCCTACAATACGAAGTATCTGGGCG
TTTATGTGATGTCGATGTTAGGCAACTCCACTTTTAAAGATGATTTAGCAGTCGGTGATACGATTACCGCGATTGATCAT
CATCAATTTAAAAATGCCAATGCTTTTGTAAAGTATGTCCAAGGTTTGAAAGTTGGTCAAAAGGTCACGGTTAGTTACGA
TCATGGTCAAAAACATCAAACGGCAACGCATCGTTTGATTAAATTACTAAGGACGCATCATCCGGGCCTCGGGATTACGT
TAACAGATCATTCTAAAATCGAAACCGATATCCCGGTTAAAATTGATGCCGGTGATATTGGGGGCCCATCTGCAGGCTTG
ATGTTTACGTTGCAAGTTTATAATCAATTAACGAAGCAAAATCTCCAAAAGGGTCGTAAAATTGCGGGGACCGGCACAAT
GGCTGCTGATGGCACTGTAGGTGCTATTGGTGGGATTGATAAAAAGGTACTGGTCGCTAGTCAAGAAGGCGCAACCGTCT
TTTTTGCACCTAATGATCCTGTAACAAAGGCAATTTTAAAGGTTGATCCTGATTATCAAAATAATTATACAATCGCTAAA
AATGCCGCTAAAAAAATTCATACTAAGATGAAGATCGTACCGGTCAAAACCTTAGATGATGCGTTAACTTATTTGAAAAA
TCATTAA

Domains

Predicted by InterProScan.

• PDZ domain (PDZ_2) (132-196)

• Lon protease (S16) C-terminal proteolytic domain (Lon_C) (202-310)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sepM	Streptococcus mutans UA159	44.253	100	0.443