Detailed information NTG0601475

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: K7H19_RS06965
• Genome accession: NZ_CP082323
• Coordinates: 1318273..1319406 (+)
• Length: 377 a.a.
• NCBI ID: WP_011228636.1
• Uniprot ID: -
• Organism: Thermus thermophilus strain N-1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1313273..1324406

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K7H19_RS06930 (K7H19_06930)	-	1313274..1314032 (+)	759	WP_011228633.1	type III pantothenate kinase	-
K7H19_RS06935 (K7H19_06935)	-	1313995..1314360 (-)	366	WP_164926058.1	hypothetical protein	-
K7H19_RS06950 (K7H19_06950)	-	1315130..1316536 (+)	1407	WP_011228635.1	HD-GYP domain-containing protein	-
K7H19_RS06955 (K7H19_06955)	-	1316587..1317078 (+)	492	WP_011173430.1	DUF5317 domain-containing protein	-
K7H19_RS06960 (K7H19_06960)	-	1317133..1318137 (+)	1005	WP_011173431.1	homoisocitrate dehydrogenase	-
K7H19_RS06965 (K7H19_06965)	pilM	1318273..1319406 (+)	1134	WP_011228636.1	type IV pilus assembly protein PilM	Machinery gene
K7H19_RS06970 (K7H19_06970)	pilN	1319399..1320022 (+)	624	WP_011228637.1	competence protein	Machinery gene
K7H19_RS06975 (K7H19_06975)	pilO	1320012..1320593 (+)	582	WP_011173434.1	type 4a pilus biogenesis protein PilO	Machinery gene
K7H19_RS06980 (K7H19_06980)	pilW	1320590..1321468 (+)	879	WP_011228638.1	competence protein	Machinery gene
K7H19_RS06985 (K7H19_06985)	pilQ	1321465..1323738 (+)	2274	WP_011228639.1	secretin N-terminal domain-containing protein	Machinery gene

Sequence

Protein

• Length: 377 a.a.
• Molecular weight: 41338.90 Da
• Isoelectric Point: 4.3805

>NTDB_id=601475 K7H19_RS06965 WP_011228636.1 1318273..1319406(+) (pilM) [Thermus thermophilus strain N-1]
MFKSLSQLFRPRVEALGLEIGASALKLVEVSGNPPALKALASRPTPPGLLMEGMVAEPAALAQEIKELLLEARTRKRYVV
TALSNLAVILRPIQVPKMPLKEMEEAVRWEAERYIPFPIDEVVLDFAPLTPLSEVQEGEQVQVMVAAARQEAVAGVLEAL
RGAGLVPVVLDVKPFAGLYPLEARLAEEPDRVFLALDIGAESTSLVLLRGDKPLAVRVLTLSGKDFTEAIARSFNLDLLA
AEEVKRTYGMATLPTEDEELLLDFDAERERYSPGRIYDAIRPVLVELTQELRRSLEFFRIQLEEASPEVGYLLGGGSKLR
GLASLLTDTLGVNFEPVNPWEAVAVDPKRFESEQLQEIGPEFAVALGLALRGVEPLD

Nucleotide

• Length: 1134 bp

>NTDB_id=601475 K7H19_RS06965 WP_011228636.1 1318273..1319406(+) (pilM) [Thermus thermophilus strain N-1]
GTGTTCAAAAGCCTTAGCCAGCTCTTCCGACCCAGGGTTGAGGCCCTGGGCTTGGAGATCGGGGCCTCCGCCCTGAAGCT
CGTGGAGGTGTCCGGGAACCCCCCTGCCCTCAAGGCCCTGGCCTCCCGCCCCACCCCGCCCGGCCTCCTGATGGAGGGAA
TGGTGGCCGAGCCCGCCGCGCTGGCCCAGGAGATCAAGGAGCTTCTCCTCGAGGCCCGCACCCGCAAGCGCTACGTGGTC
ACCGCCCTCTCCAACCTGGCGGTCATCCTCCGCCCCATCCAGGTCCCCAAGATGCCCCTCAAGGAGATGGAGGAGGCGGT
GCGCTGGGAGGCGGAGCGCTACATTCCCTTCCCCATTGACGAGGTGGTCCTGGACTTCGCCCCCCTGACCCCCCTCTCCG
AGGTGCAGGAGGGGGAGCAGGTCCAGGTGATGGTGGCGGCGGCGCGGCAGGAGGCGGTGGCGGGGGTCCTCGAGGCCCTG
AGGGGGGCGGGGCTCGTCCCCGTGGTGCTGGACGTGAAGCCCTTCGCCGGGCTTTACCCTCTGGAGGCCAGGCTTGCGGA
GGAGCCCGACCGGGTCTTCCTCGCCCTGGACATCGGGGCCGAGAGCACGAGCCTCGTCCTGCTCCGGGGGGACAAGCCCC
TGGCGGTGCGCGTCCTCACCCTCTCGGGCAAGGACTTCACCGAGGCCATCGCCCGAAGCTTCAACCTGGACCTCCTCGCC
GCCGAGGAGGTGAAGCGGACCTACGGGATGGCCACCCTCCCCACCGAGGACGAGGAGCTCCTCCTGGACTTTGACGCCGA
GCGGGAGCGCTACAGCCCGGGGCGCATCTACGACGCCATCCGCCCGGTGCTGGTGGAGCTCACCCAGGAGCTCCGCCGTA
GCCTGGAGTTCTTCCGCATCCAGCTGGAGGAGGCCTCGCCCGAGGTGGGCTACCTCCTGGGCGGGGGGAGCAAGCTCAGG
GGGCTCGCCTCCCTCCTCACCGACACCCTGGGGGTGAACTTTGAGCCCGTCAACCCCTGGGAGGCGGTGGCGGTGGACCC
CAAGCGCTTTGAGTCGGAGCAACTCCAGGAGATCGGGCCGGAGTTCGCCGTAGCCCTGGGCTTGGCGTTGAGGGGGGTGG
AGCCCCTTGATTAG

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (17-372)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Thermus thermophilus HB27	99.469	100	0.995