Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   HU826_RS08025 Genome accession   NZ_CP082280
Coordinates   1699193..1699819 (+) Length   208 a.a.
NCBI ID   WP_058609205.1    Uniprot ID   A0AB38P8X5
Organism   Enterobacter cancerogenus strain HAEC1     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 1694193..1704819
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HU826_RS08005 (HU826_08005) - 1694595..1696355 (-) 1761 WP_058609207.1 Lon protease family protein -
  HU826_RS08010 (HU826_08010) matP 1696542..1696994 (+) 453 WP_006174540.1 macrodomain Ter protein MatP -
  HU826_RS08015 (HU826_08015) ompA 1697058..1698110 (-) 1053 WP_127463528.1 porin OmpA -
  HU826_RS08020 (HU826_08020) sulA 1698466..1698975 (-) 510 WP_058609206.1 SOS-induced cell division inhibitor SulA -
  HU826_RS08025 (HU826_08025) sxy/tfoX 1699193..1699819 (+) 627 WP_058609205.1 TfoX/Sxy family DNA transformation protein Regulator
  HU826_RS08030 (HU826_08030) yccS 1699776..1701938 (-) 2163 WP_058609204.1 YccS family putative transporter -
  HU826_RS08035 (HU826_08035) - 1701958..1702404 (-) 447 WP_006174548.1 YccF domain-containing protein -
  HU826_RS08040 (HU826_08040) helD 1702526..1704580 (+) 2055 WP_058609203.1 DNA helicase IV -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 24059.62 Da        Isoelectric Point: 9.1543

>NTDB_id=600979 HU826_RS08025 WP_058609205.1 1699193..1699819(+) (sxy/tfoX) [Enterobacter cancerogenus strain HAEC1]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDDAVFAMVSDGELYLRACEESATYCVKHPSSFLTLVKRGRPVLLN
YYRVDEGLWQDRQKLLQLSTYALDAARKERSLRYQRNRLKDLPNLTFQIEVLLYEAGITNEETLRELGAKTSWLKIRSKN
RALSIKVLFALEGAIEGMHEAALPANIRRELTEWFNTLPEVQESRSAR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=600979 HU826_RS08025 WP_058609205.1 1699193..1699819(+) (sxy/tfoX) [Enterobacter cancerogenus strain HAEC1]
ATGAAAAAGATATCATATGAACGGATTTATAAATCACAGGAATATCTCTCCCCTCTGGGTGAAATTCACCACCGGGCGCT
GTTCGGCGGCTACACCCTGGCGGTAGACGATGCGGTGTTTGCCATGGTGTCAGACGGTGAACTTTACCTGCGTGCCTGCG
AGGAGAGCGCGACCTATTGTGTCAAGCATCCTTCTTCCTTCTTAACGCTTGTTAAGCGAGGCCGCCCCGTCCTGCTGAAT
TACTATCGCGTGGATGAAGGGCTGTGGCAGGATCGGCAAAAACTGCTTCAGCTTTCCACTTATGCCCTCGATGCGGCACG
AAAAGAGCGTAGCCTGCGCTATCAACGAAACCGGCTCAAGGATCTGCCTAACCTGACTTTCCAGATTGAAGTGTTGCTCT
ACGAAGCCGGCATTACGAATGAAGAGACGTTGCGGGAGCTTGGCGCAAAGACCAGTTGGCTAAAAATCAGATCGAAAAAC
CGGGCGCTCAGTATCAAGGTGCTTTTTGCCCTTGAAGGGGCCATTGAGGGGATGCATGAGGCGGCACTCCCGGCGAACAT
TCGCCGGGAGCTTACGGAGTGGTTTAATACACTGCCTGAGGTGCAGGAGAGTCGTTCCGCCAGGTAG

Domains

Predicted by InterproScan.

TfoX N-terminal domain (TfoX_N)

(14-106)

TfoX C-terminal domain (TfoX_C)

(116-194)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

61.576

97.596

0.601