Detailed information NTG0060095

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: K6J73_RS02655
• Genome accession: NZ_AP018780
• Coordinates: 536272..537270 (-)
• Length: 332 a.a.
• NCBI ID: WP_196251963.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain CHBN-IV-1 isolate 13H36
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 531272..542270

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6J73_RS02630 (CHBNIV1_04910)	tehA	532247..533191 (+)	945	WP_221253347.1	dicarboxylate transporter/tellurite-resistance protein TehA	-
K6J73_RS02635 (CHBNIV1_04920)	tsaA	533244..533963 (-)	720	WP_221253351.1	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	-
K6J73_RS02640 (CHBNIV1_04930)	menA	534025..534936 (+)	912	WP_221253352.1	1,4-dihydroxy-2-naphthoate octaprenyltransferase	-
K6J73_RS02645 (CHBNIV1_04940)	rraA	534988..535476 (+)	489	WP_221253355.1	ribonuclease E activity regulator RraA	-
K6J73_RS02650 (CHBNIV1_04950)	-	535616..536167 (-)	552	WP_005649445.1	TIGR00645 family protein	-
K6J73_RS02655 (CHBNIV1_04960)	cytR	536272..537270 (-)	999	WP_196251963.1	substrate-binding domain-containing protein	Regulator
K6J73_RS02660 (CHBNIV1_04970)	rbsK	537298..538221 (-)	924	WP_221253356.1	ribokinase	-
K6J73_RS02665 (CHBNIV1_04980)	-	538307..539554 (-)	1248	WP_005691308.1	NupC/NupG family nucleoside CNT transporter	-
K6J73_RS02670 (CHBNIV1_04990)	-	539598..540530 (-)	933	WP_005691310.1	nucleoside hydrolase	-
K6J73_RS02675 (CHBNIV1_05000)	-	540718..542160 (-)	1443	WP_221253358.1	DNA recombination protein RmuC	-

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 36741.49 Da
• Isoelectric Point: 8.2275

>NTDB_id=60095 K6J73_RS02655 WP_196251963.1 536272..537270(-) (cytR) [Haemophilus influenzae strain CHBN-IV-1 isolate 13H36]
MATMKDIARLAQVSTSTVSHVINGSRFVSDEIREKVMRIVAELNYTPSAVARSLKVRETKTIGLLVTATNNPFFAEVMAG
VEQYCQQHQYNLIIAATGGDAKRLQQNLQTLMHKQVDGLLLMCGDSRFQADIELAISLPLVVMDWWFTELNADKILENSA
LGGYLATKALIDAGHRKIGIITGNLKKSVAQNRLQGYKNALSEAKIALNPHWIVESHFDFEGGVLGIQSLLTQSSRPTAV
FCCSDTIAVGAYQAIQQQGLRIPQDLSIMGYDDIELARYLSPPLSTICQPKAKLGKLAVETLLQRIKNPNENYRTLVLEP
TCVLRESIYSFK

Nucleotide

• Length: 999 bp

>NTDB_id=60095 K6J73_RS02655 WP_196251963.1 536272..537270(-) (cytR) [Haemophilus influenzae strain CHBN-IV-1 isolate 13H36]
ATGGCGACAATGAAAGATATTGCACGACTGGCGCAAGTTTCGACTTCCACAGTTTCACATGTCATTAATGGATCGCGTTT
TGTTAGCGATGAAATTCGTGAGAAAGTGATGCGTATTGTCGCTGAACTGAATTACACCCCCTCAGCTGTTGCACGAAGTC
TTAAGGTGCGCGAAACCAAAACTATCGGGCTACTTGTCACCGCAACAAATAATCCATTCTTTGCAGAAGTGATGGCTGGC
GTGGAGCAATATTGTCAGCAGCATCAATATAATCTTATTATTGCTGCCACTGGTGGCGATGCCAAACGCCTACAACAAAA
TCTGCAAACTCTAATGCACAAACAAGTGGATGGTTTGCTCTTGATGTGTGGTGATAGCCGTTTTCAGGCTGATATAGAGT
TAGCCATTTCGCTACCACTCGTTGTGATGGACTGGTGGTTTACTGAGTTAAATGCAGATAAAATACTCGAAAATTCAGCA
CTTGGTGGCTATTTGGCGACAAAAGCATTAATTGATGCAGGACATCGTAAAATTGGCATTATTACGGGAAATCTCAAAAA
ATCTGTCGCACAAAATCGTTTGCAAGGTTATAAAAATGCGCTCTCGGAAGCAAAAATTGCGTTAAATCCTCATTGGATTG
TCGAAAGTCATTTTGACTTTGAAGGCGGTGTACTTGGCATACAATCTTTACTTACTCAATCTTCACGTCCAACAGCAGTT
TTTTGTTGTAGTGACACCATTGCTGTCGGTGCATACCAAGCTATTCAGCAACAAGGCTTACGTATTCCGCAAGATCTTTC
AATTATGGGTTATGATGACATTGAATTGGCTCGTTATCTCTCGCCTCCTCTCTCCACCATTTGCCAACCGAAAGCTAAAC
TTGGCAAACTCGCTGTTGAAACACTATTGCAACGAATTAAAAATCCTAATGAAAATTACCGCACTTTGGTGTTAGAACCG
ACTTGTGTGTTAAGAGAGTCTATTTACAGTTTCAAATAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-327)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	36.89	98.795	0.364
cytR	Vibrio cholerae C6706	36.585	98.795	0.361