Detailed information NTG0600882

Bioinformatically predicted

Overview

• Name: comA
• Type: Regulator
• Locus tag: K7B13_RS15175
• Genome accession: NZ_CP082278
• Coordinates: 2961322..2961966 (-)
• Length: 214 a.a.
• NCBI ID: WP_014472195.1
• Uniprot ID: A0AAP7N9U7
• Organism: Bacillus amyloliquefaciens strain 35M
• Function: promoting transcription of comS (predicted from homology) Competence regulation

Genomic Context

Location: 2956322..2966966

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K7B13_RS15140 (K7B13_15140)	-	2957507..2957938 (+)	432	WP_045509497.1	Na(+)/H(+) antiporter subunit B	-
K7B13_RS15145 (K7B13_15145)	-	2957938..2958279 (+)	342	WP_013353388.1	Na(+)/H(+) antiporter subunit C	-
K7B13_RS15150 (K7B13_15150)	-	2958272..2959753 (+)	1482	WP_065982195.1	Na+/H+ antiporter subunit D	-
K7B13_RS15155 (K7B13_15155)	-	2959759..2960235 (+)	477	WP_212099076.1	Na+/H+ antiporter subunit E	-
K7B13_RS15160 (K7B13_15160)	-	2960235..2960519 (+)	285	WP_045509491.1	Na(+)/H(+) antiporter subunit F1	-
K7B13_RS15165 (K7B13_15165)	mnhG	2960503..2960877 (+)	375	WP_115997042.1	monovalent cation/H(+) antiporter subunit G	-
K7B13_RS15170 (K7B13_15170)	-	2960917..2961300 (-)	384	WP_212099079.1	hotdog fold thioesterase	-
K7B13_RS15175 (K7B13_15175)	comA	2961322..2961966 (-)	645	WP_014472195.1	response regulator transcription factor	Regulator
K7B13_RS15180 (K7B13_15180)	-	2962047..2962841 (-)	795	Protein_2955	sensor histidine kinase	-
K7B13_RS15185 (K7B13_15185)	-	2962933..2963112 (-)	180	WP_212098053.1	hypothetical protein	-
K7B13_RS15190 (K7B13_15190)	-	2963342..2963587 (-)	246	WP_212098056.1	hypothetical protein	-
K7B13_RS15195 (K7B13_15195)	-	2963702..2963920 (-)	219	WP_212098059.1	hypothetical protein	-
K7B13_RS15200 (K7B13_15200)	-	2964190..2964843 (-)	654	WP_212098062.1	replication-relaxation family protein	-
K7B13_RS15205 (K7B13_15205)	-	2964843..2966000 (-)	1158	WP_212098065.1	FtsK/SpoIIIE domain-containing protein	-
K7B13_RS15210 (K7B13_15210)	-	2966004..2966198 (-)	195	WP_212098069.1	hypothetical protein	-
K7B13_RS15215 (K7B13_15215)	-	2966497..2966712 (+)	216	WP_212098072.1	helix-turn-helix transcriptional regulator	-
K7B13_RS15220 (K7B13_15220)	-	2966739..2966879 (-)	141	WP_222891142.1	hypothetical protein	-

Sequence

Protein

• Length: 214 a.a.
• Molecular weight: 24253.65 Da
• Isoelectric Point: 4.9953

>NTDB_id=600882 K7B13_RS15175 WP_014472195.1 2961322..2961966(-) (comA) [Bacillus amyloliquefaciens strain 35M]
MKKILVIDDHPAVMEGTKTILETDTNLSVDCLSPDASEQFVLRHDFSAYDLILMDLNLGDDLSGIELSKKILKENPLCKI
IVYTGYEVEDYFEESIRAGLHGAISKTESKEKIMQYIYHVLNGQILVDFSYFKQLLTQQKTKTSSSPQSEQDRLTPRERH
ILQEVEKGLTNQEIADALHLSKRSIEYSLTSIFNKLNVGSRTEAVLIAKSDNVL

Nucleotide

• Length: 645 bp

>NTDB_id=600882 K7B13_RS15175 WP_014472195.1 2961322..2961966(-) (comA) [Bacillus amyloliquefaciens strain 35M]
ATGAAAAAGATACTAGTGATTGATGATCATCCGGCTGTCATGGAGGGCACCAAGACGATTCTGGAAACGGACACGAATCT
TTCTGTCGATTGCCTTAGTCCCGATGCCAGTGAACAATTCGTTCTTCGGCATGATTTTTCAGCTTACGATCTCATATTAA
TGGATTTAAATCTGGGTGATGACCTCAGCGGCATAGAGCTTTCCAAGAAAATCTTAAAAGAGAATCCTCTCTGCAAAATC
ATTGTCTACACAGGCTATGAGGTTGAAGATTATTTTGAAGAATCCATCCGCGCGGGCCTGCACGGCGCCATCAGCAAAAC
TGAATCTAAAGAGAAAATCATGCAATACATATATCACGTGCTTAACGGACAGATTTTAGTTGATTTCTCCTATTTCAAAC
AGCTGTTGACCCAGCAAAAAACAAAAACGTCTTCTTCCCCTCAAAGTGAGCAGGATCGGTTAACACCGAGAGAGCGCCAT
ATTCTCCAAGAGGTCGAAAAAGGTTTGACCAATCAGGAAATCGCCGATGCGCTTCACTTAAGCAAGCGGTCGATTGAATA
CAGCCTGACATCCATTTTTAACAAGCTGAATGTCGGCTCCCGCACTGAAGCGGTGCTGATCGCCAAGTCAGATAATGTAC
TATAA

Domains

Predicted by InterproScan.

• Bacterial regulatory proteins, luxR family (GerE) (153-208)

• Response regulator receiver domain (Response_reg) (4-117)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Bacillus subtilis subsp. subtilis str. 168	85.981	100	0.86