Detailed information NTG0600871

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: K7B13_RS12330
• Genome accession: NZ_CP082278
• Coordinates: 2436287..2438638 (-)
• Length: 783 a.a.
• NCBI ID: WP_212098512.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain 35M
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2431287..2443638

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K7B13_RS12295 (K7B13_12295)	-	2431649..2431987 (-)	339	WP_045510470.1	YqxA family protein	-
K7B13_RS12300 (K7B13_12300)	spoIIP	2432004..2433197 (-)	1194	WP_212098511.1	stage II sporulation protein P	-
K7B13_RS12305 (K7B13_12305)	gpr	2433265..2434371 (-)	1107	WP_014470697.1	GPR endopeptidase	-
K7B13_RS12310 (K7B13_12310)	rpsT	2434574..2434840 (+)	267	WP_003152876.1	30S ribosomal protein S20	-
K7B13_RS12315 (K7B13_12315)	holA	2434858..2435899 (-)	1042	Protein_2400	DNA polymerase III subunit delta	-
K7B13_RS12320 (K7B13_12320)	-	2435939..2436093 (-)	155	Protein_2401	hypothetical protein	-
K7B13_RS12325 (K7B13_12325)	-	2436134..2436268 (+)	135	WP_003152870.1	YqzM family protein	-
K7B13_RS12330 (K7B13_12330)	comEC	2436287..2438638 (-)	2352	WP_212098512.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
K7B13_RS12335 (K7B13_12335)	-	2438639..2439208 (-)	570	WP_065981916.1	ComE operon protein 2	-
K7B13_RS12340 (K7B13_12340)	comEA	2439274..2439888 (-)	615	WP_212098514.1	helix-hairpin-helix domain-containing protein	Machinery gene
K7B13_RS12345 (K7B13_12345)	comER	2439948..2440769 (+)	822	WP_065981918.1	late competence protein ComER	-
K7B13_RS12350 (K7B13_12350)	-	2440838..2441575 (-)	738	WP_014470703.1	class I SAM-dependent methyltransferase	-
K7B13_RS12355 (K7B13_12355)	rsfS	2441572..2441928 (-)	357	WP_115997664.1	ribosome silencing factor	-
K7B13_RS12360 (K7B13_12360)	yqeK	2441945..2442505 (-)	561	WP_032856887.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
K7B13_RS12365 (K7B13_12365)	-	2442495..2443064 (-)	570	WP_065981920.1	nicotinate-nucleotide adenylyltransferase	-
K7B13_RS12370 (K7B13_12370)	yhbY	2443075..2443365 (-)	291	WP_014470707.1	ribosome assembly RNA-binding protein YhbY	-

Sequence

Protein

• Length: 783 a.a.
• Molecular weight: 87170.04 Da
• Isoelectric Point: 9.1300

>NTDB_id=600871 K7B13_RS12330 WP_212098512.1 2436287..2438638(-) (comEC) [Bacillus amyloliquefaciens strain 35M]
MKYKYLLLPLAAVSATAGIAAANSFWILFFFLLYLLFIIVKIKQHTPVIVCLVSFCLYFFIYTACDAANVSRYQAGSYTE
QALIINIPKVDGAKMSAVIRTHDKEKWAASYKIRSLEEKKLIEQLEPGMRCTFTGSLEQPGHATIPGGFDYKEYLYSQHI
HWIFSVTSIKQCEKSEQPLFKLLNIRKNLISIIRNHVPESSAGIVEALTLGERFSIEDDILSAYQNLGVVHLMAISGMHV
GLITAGLFYALIRIGLTREKAGMLLLLFLPVYTLLSGAAPSVLRASLMLGFYIAGTLLKRSIHSSAALSMSYLLLLLFDP
YLLWQAGFQLSFAVSAALILSSSILKKAGKNRLAGLAMASFIAELSSLPFLLYHFQQISLVSFPMNMVMVPFYTLFVIPF
SVIGFLLLLFSRQAGEFLFYLFDLVMKPVHDFITYAASVDLFAMIASKPDFLSLLMLAVSVFTLFAALEKRGFLKLRKSA
LFFFAVLAYIMFRPYFSPWGEADMLDIGQGDSLFISAPHRKGTVMVDTGGVIAYSEESWKEKHHPYSIGEKALIPFLNGK
GVKKLDALILTHADQDHIGEAGVLIKKHKVKRLIVPVGFVKEQKDREILNMAKENNIPVAEAKRGDTITAGDLQFQVLSP
ESPDGRSKNDSSLVLWTVLGGVSWLLTGDLESDGETEVLKTYPNLKADILKAGHHGSKSSTSEAFLKQLQPETALISAGK
DNRYHHPHEEVLERLKAYSVNVLRTDVSGTIQYRFKKGAGTFSVFPPYDIEETRAQEVKKTAD

Nucleotide

• Length: 2352 bp

>NTDB_id=600871 K7B13_RS12330 WP_212098512.1 2436287..2438638(-) (comEC) [Bacillus amyloliquefaciens strain 35M]
ATGAAATATAAATACCTTCTTCTCCCTCTGGCGGCGGTTTCTGCAACCGCGGGAATTGCCGCCGCTAATTCCTTCTGGAT
CCTATTCTTTTTCCTTCTGTATCTTCTCTTTATTATCGTAAAAATAAAGCAGCACACACCGGTTATCGTCTGCCTCGTTT
CTTTTTGTCTTTATTTCTTTATTTATACGGCTTGTGACGCTGCGAATGTATCCCGGTATCAGGCCGGCAGCTATACTGAA
CAGGCTCTCATAATAAACATTCCGAAGGTTGACGGAGCGAAAATGTCAGCCGTTATCCGTACCCATGACAAAGAAAAATG
GGCTGCTTCGTACAAAATCCGGTCCCTTGAAGAAAAAAAACTCATTGAACAGCTGGAACCGGGGATGCGCTGTACGTTTA
CAGGCTCACTGGAACAGCCCGGACATGCGACGATTCCCGGGGGTTTTGATTATAAGGAATATCTTTACTCCCAGCATATT
CACTGGATATTTTCCGTTACTTCCATTAAGCAGTGCGAAAAATCCGAACAGCCGCTGTTTAAGCTTCTGAACATCAGAAA
GAATTTGATTTCGATCATTCGGAATCATGTACCTGAATCTTCCGCGGGAATTGTTGAAGCGCTGACCTTAGGTGAAAGAT
TTTCTATAGAGGACGACATACTGAGCGCTTATCAAAATTTGGGAGTCGTTCATTTAATGGCGATTTCCGGAATGCATGTC
GGTCTTATTACGGCGGGATTATTTTATGCCCTTATCAGAATTGGACTGACAAGAGAAAAGGCGGGGATGTTGCTGCTGCT
TTTTTTGCCGGTGTATACGTTGTTAAGCGGTGCCGCCCCTTCTGTACTGCGCGCATCCCTCATGCTGGGATTTTATATCG
CCGGAACTCTTTTGAAACGCAGCATTCATTCCTCGGCTGCATTGTCCATGTCTTATCTGCTGCTTCTGCTGTTTGATCCT
TACCTCCTTTGGCAGGCGGGCTTCCAGCTTTCCTTTGCGGTAAGCGCCGCTTTAATTCTGTCATCCTCCATTTTAAAGAA
AGCAGGGAAAAACAGACTCGCAGGGCTTGCGATGGCTTCATTCATTGCGGAGCTCAGTTCGCTTCCGTTTCTTCTCTATC
ATTTTCAGCAGATTTCGCTCGTCAGTTTTCCGATGAATATGGTGATGGTGCCTTTTTATACGTTATTTGTCATTCCGTTT
TCTGTCATCGGTTTCCTTCTTCTCTTATTTTCCAGGCAGGCGGGGGAATTTTTGTTTTACCTGTTTGACCTTGTGATGAA
GCCTGTGCATGATTTCATTACATATGCGGCATCCGTTGATTTATTTGCAATGATTGCGTCAAAGCCTGACTTTCTGTCGC
TTCTTATGCTTGCGGTTTCCGTTTTTACGCTTTTTGCAGCTTTGGAAAAGAGAGGTTTTTTAAAGCTCAGGAAATCGGCT
CTTTTTTTCTTTGCGGTTTTGGCTTATATAATGTTCCGTCCTTATTTCAGTCCTTGGGGAGAAGCGGATATGCTTGATAT
CGGGCAGGGAGATTCACTGTTTATAAGTGCCCCGCACCGTAAAGGTACCGTAATGGTTGATACAGGAGGAGTGATTGCTT
ATTCCGAAGAATCGTGGAAAGAAAAACACCACCCGTATTCTATCGGCGAGAAGGCTTTAATTCCGTTTTTGAACGGAAAG
GGAGTGAAAAAGCTGGATGCACTGATTTTAACCCATGCGGATCAGGATCATATCGGGGAAGCCGGAGTATTAATCAAAAA
ACATAAAGTGAAACGGTTAATTGTCCCCGTGGGGTTCGTGAAGGAACAGAAGGATCGGGAAATATTGAATATGGCGAAAG
AAAATAACATTCCCGTTGCAGAAGCAAAACGGGGCGATACCATAACAGCCGGTGATCTTCAGTTTCAGGTGCTGTCTCCG
GAGTCGCCTGACGGAAGGAGTAAAAATGATTCGTCACTGGTGCTTTGGACGGTTTTAGGCGGAGTGAGCTGGCTTTTGAC
GGGAGATTTAGAATCGGACGGCGAAACAGAGGTGCTGAAAACGTATCCGAATCTGAAGGCCGATATATTGAAGGCCGGTC
ATCACGGCAGCAAAAGCTCTACGAGTGAAGCCTTTTTGAAACAGCTTCAGCCGGAGACAGCGCTGATTTCAGCAGGAAAA
GATAATCGCTATCATCATCCGCATGAAGAAGTGCTGGAGCGTCTGAAAGCTTACTCTGTCAATGTGCTTCGCACTGATGT
TAGCGGAACGATTCAATACAGATTTAAAAAAGGCGCCGGAACGTTTTCTGTCTTCCCTCCATATGATATAGAAGAAACCA
GGGCGCAGGAAGTAAAAAAGACTGCCGATTGA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (508-719)

• Competence protein (Competence) (208-470)

• Domain of unknown function (DUF4131) (DUF4131) (26-171)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Bacillus subtilis subsp. subtilis str. 168	55.829	98.595	0.55