Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   K7B13_RS05475 Genome accession   NZ_CP082278
Coordinates   1104258..1104449 (+) Length   63 a.a.
NCBI ID   WP_013351814.1    Uniprot ID   A0AAP7TCS9
Organism   Bacillus amyloliquefaciens strain 35M     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1099258..1109449
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K7B13_RS05445 (K7B13_05445) argF 1100098..1101054 (+) 957 WP_065981158.1 ornithine carbamoyltransferase -
  K7B13_RS05450 (K7B13_05450) - 1101145..1101324 (+) 180 WP_212100903.1 YjzC family protein -
  K7B13_RS05455 (K7B13_05455) - 1101365..1101553 (-) 189 WP_013351810.1 YjzD family protein -
  K7B13_RS05460 (K7B13_05460) - 1101814..1102548 (+) 735 WP_065981159.1 hypothetical protein -
  K7B13_RS05465 (K7B13_05465) - 1102631..1103197 (+) 567 WP_212100906.1 hypothetical protein -
  K7B13_RS05470 (K7B13_05470) med 1103292..1104245 (+) 954 WP_013351813.1 BMP family ABC transporter substrate-binding protein Regulator
  K7B13_RS05475 (K7B13_05475) comZ 1104258..1104449 (+) 192 WP_013351814.1 ComZ family protein Regulator
  K7B13_RS05480 (K7B13_05480) - 1104479..1104697 (-) 219 WP_013351815.1 hypothetical protein -
  K7B13_RS05485 (K7B13_05485) - 1104863..1105801 (+) 939 WP_065981161.1 beta-ketoacyl-ACP synthase III -
  K7B13_RS05490 (K7B13_05490) fabF 1105825..1107063 (+) 1239 WP_065981162.1 beta-ketoacyl-ACP synthase II -
  K7B13_RS05495 (K7B13_05495) - 1107147..1107932 (+) 786 WP_212100909.1 DUF2268 domain-containing protein -
  K7B13_RS05500 (K7B13_05500) - 1108106..1109092 (+) 987 WP_212100912.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7202.35 Da        Isoelectric Point: 4.3344

>NTDB_id=600845 K7B13_RS05475 WP_013351814.1 1104258..1104449(+) (comZ) [Bacillus amyloliquefaciens strain 35M]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMNLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=600845 K7B13_RS05475 WP_013351814.1 1104258..1104449(+) (comZ) [Bacillus amyloliquefaciens strain 35M]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
AGGCATTGATCTGTCTATGGAAATGATTCAGCCGTTCATGAACCTGTTTACATCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

87.931

92.063

0.81