Detailed information NTG0600824

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: NDQ67_RS03270
• Genome accession: NZ_CP098546
• Coordinates: 636340..637584 (+)
• Length: 414 a.a.
• NCBI ID: WP_003693001.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain 9126
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 631340..642584

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NDQ67_RS03250 (NDQ67_03235)	-	631822..634056 (-)	2235	Protein_637	DNA methyltransferase	-
NDQ67_RS03255 (NDQ67_03245)	truB	634273..635193 (-)	921	WP_003688873.1	tRNA pseudouridine(55) synthase TruB	-
NDQ67_RS03260 (NDQ67_03250)	-	635251..635775 (-)	525	WP_003688872.1	hypothetical protein	-
NDQ67_RS03265 (NDQ67_03255)	rbfA	635786..636157 (-)	372	WP_003692998.1	30S ribosome-binding factor RbfA	-
NDQ67_RS03270 (NDQ67_03260)	clpX	636340..637584 (+)	1245	WP_003693001.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
NDQ67_RS03275 (NDQ67_03265)	-	637691..638884 (-)	1194	WP_003688867.1	aspartate aminotransferase family protein	-
NDQ67_RS03280 (NDQ67_03270)	-	639288..639788 (+)	501	WP_010357954.1	hypothetical protein	-
NDQ67_RS03285 (NDQ67_03275)	-	639873..640427 (+)	555	WP_003688863.1	hypothetical protein	-
NDQ67_RS03290 (NDQ67_03280)	-	640441..640641 (+)	201	WP_003693002.1	hypothetical protein	-
NDQ67_RS03300 (NDQ67_03290)	-	640992..642380 (-)	1389	WP_003693004.1	DEAD/DEAH box helicase	-

Sequence

Protein

• Length: 414 a.a.
• Molecular weight: 44879.29 Da
• Isoelectric Point: 4.8622

>NTDB_id=600824 NDQ67_RS03270 WP_003693001.1 636340..637584(+) (clpX) [Neisseria gonorrhoeae strain 9126]
MSNENRTCSFCGKSKSHVKHLIEGENAFICDECVSNCLEILYEGDNGGTPPENAGGEPEESGKLPTPAEIVANLDDYVIG
QGQAKKALAVAVYNHYKRLRHPKADGGVELSKSNILLIGPTGSGKTLLAQSLARKLDVPFVMADATTLTEAGYVGEDVEQ
IITKLLGKCDFDVEKAQHGIVYIDEIDKISRKSDNPSITRDVSGEGVQQALLKLIEGTVASVPPQGGRKHPNQEFINVDT
ANILFICGGAFAGLEKVIRQRTEKGGIGFGASVHSKDENAGITKLFGIVEPEDLIKFGLIPELIGRLPVIATLEELDEDA
LINILTEPKNALVKQYQALFCIENVGLEFEEGALRSIARQAMERKTGARGLRSIVERCLLDTMYRLPDLQGLKKVVVGKA
VIEEGREPELVFES

Nucleotide

• Length: 1245 bp

>NTDB_id=600824 NDQ67_RS03270 WP_003693001.1 636340..637584(+) (clpX) [Neisseria gonorrhoeae strain 9126]
ATGTCCAACGAAAACCGTACCTGTTCCTTTTGCGGAAAATCCAAATCACACGTCAAACATTTGATTGAGGGCGAAAACGC
CTTTATCTGCGACGAATGCGTCTCAAACTGCCTCGAAATATTGTACGAAGGCGACAACGGCGGCACGCCTCCGGAAAATG
CCGGAGGGGAGCCGGAAGAATCCGGCAAACTGCCCACGCCCGCCGAAATCGTTGCCAACCTCGACGATTATGTCATCGGG
CAGGGGCAGGCGAAAAAGGCGCTGGCGGTTGCGGTTTACAACCATTACAAACGCCTGCGCCACCCGAAAGCCGACGGCGG
TGTCGAATTGTCGAAATCCAACATCCTGCTTATCGGCCCGACCGGATCGGGTAAAACGCTGTTGGCGCAATCTTTGGCAC
GCAAACTGGACGTGCCGTTCGTGATGGCGGATGCGACCACGCTGACCGAAGCCGGCTATGTCGGCGAAGATGTCGAACAA
ATCATTACCAAACTGTTGGGCAAATGCGATTTCGATGTCGAAAAAGCCCAGCACGGCATTGTCTATATTGACGAAATTGA
CAAAATTTCGCGTAAAAGCGACAACCCGTCCATCACGCGCGACGTGTCCGGCGAAGGCGTGCAGCAAGCCTTGCTGAAAC
TGATTGAAGGTACGGTGGCAAGCGTTCCGCCCCAAGGCGGACGCAAGCATCCGAATCAGGAATTTATCAACGTTGATACC
GCCAACATCCTGTTTATCTGCGGCGGCGCGTTTGCAGGCTTGGAAAAAGTGATTCGCCAGCGCACCGAGAAAGGTGGTAT
CGGTTTCGGCGCGTCCGTTCACAGCAAGGACGAAAATGCCGGCATTACCAAGCTGTTCGGCATCGTCGAACCGGAAGATT
TAATCAAATTCGGCCTGATTCCGGAATTAATCGGACGTTTGCCCGTGATTGCAACTTTAGAAGAACTGGATGAGGACGCG
CTGATTAATATTTTAACCGAGCCGAAAAACGCTTTGGTCAAGCAGTATCAAGCCTTGTTCTGCATAGAAAACGTCGGGTT
GGAATTTGAAGAAGGCGCATTGCGTTCCATCGCGCGGCAGGCAATGGAACGCAAAACCGGCGCGCGCGGCCTGCGTTCCA
TCGTCGAACGCTGCCTGCTCGATACGATGTACCGCCTGCCCGATTTGCAAGGCTTGAAAAAAGTGGTGGTCGGCAAGGCA
GTCATCGAAGAGGGCAGGGAACCGGAATTGGTGTTCGAGTCCTGA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (112-310)

• ClpX C4-type zinc finger (zf-C4_ClpX) (7-42)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (316-387)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	56.28	100	0.563
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	55.448	99.758	0.553