Detailed information NTG0600817

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: K6Q96_RS14465
• Genome accession: NZ_CP082275
• Coordinates: 3215517..3218894 (+)
• Length: 1125 a.a.
• NCBI ID: WP_251876586.1
• Uniprot ID: -
• Organism: Grimontia kaedaensis strain 020920N
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 3210517..3223894

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6Q96_RS14440 (K6Q96_14405)	erpA	3210694..3211035 (-)	342	WP_165017150.1	iron-sulfur cluster insertion protein ErpA	-
K6Q96_RS14445 (K6Q96_14410)	-	3211122..3211439 (-)	318	WP_251876582.1	hypothetical protein	-
K6Q96_RS14450 (K6Q96_14415)	hemL	3211518..3212807 (+)	1290	WP_251876583.1	glutamate-1-semialdehyde 2,1-aminomutase	-
K6Q96_RS14455 (K6Q96_14420)	-	3213055..3214137 (+)	1083	WP_251876584.1	AI-2E family transporter	-
K6Q96_RS14460 (K6Q96_14425)	rsmC	3214242..3215261 (+)	1020	WP_251876585.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
K6Q96_RS14465 (K6Q96_14430)	chiS	3215517..3218894 (+)	3378	WP_251876586.1	response regulator	Regulator
K6Q96_RS14470 (K6Q96_14435)	-	3219716..3221398 (+)	1683	WP_251876587.1	ABC transporter substrate-binding protein	-
K6Q96_RS14475 (K6Q96_14440)	-	3221518..3222504 (+)	987	WP_002540447.1	ABC transporter permease	-
K6Q96_RS14480 (K6Q96_14445)	-	3222507..3223532 (+)	1026	WP_251876588.1	ABC transporter permease	-

Sequence

Protein

• Length: 1125 a.a.
• Molecular weight: 126495.83 Da
• Isoelectric Point: 4.9818

>NTDB_id=600817 K6Q96_RS14465 WP_251876586.1 3215517..3218894(+) (chiS) [Grimontia kaedaensis strain 020920N]
MQKKQKFKRLQHTLMLAFLVLSITPLTLLAIFFLESHSSDLEQQSTTHLSFLRDNKKEQIISYFDARHSEVKSFSRSELA
TASGGRFYGLIAAFQQLGDTEEMARNVARERYGADSNATLPPGANDSNFIGSERYRLLHKRYDWAYKEHLKRSDFSDILL
VDIHGNVVYSTLKDDAFGSNLLSEKWRETAVGKTFSDIREAVDSPLTDSENTPIAFTDYTQQADGEMVAWFAAPIMQQGY
LHSYVLFKLPNNALDKMLNSTPQEKGYISTLLVGNDLIPRNLVTTEILAPINSTAIEAALAGLRDVGSFLSPENHRVLGA
YAPVDIPGTSWAIVLELPEEEAFARIYQLEKIFIAVMVIAILLVVIASHMLSNSITAPLLKLTWAAEQVSAGDLEQKINS
TDRDDEIGRLAVSFARMQRSIRDKLALIREQNKELEQNIQVIKQKNEELQQADRMKDDFLATTSHELRTPLHGMVGIAES
ILAGAEGPLPERQKHQLQMIINSGERLSNLVDDLLDYHKMRYGELEISPQAVDTANAVRLVIELSSHLLGGKPVRIINQV
PIDLPLVRADEQRLEQVLYNLIGNAIKYTDEGKIIISATVLEGQLRIQVVDTGQGIPSDQLEYIFEPLTQASGNAAQYRQ
GAGLGLSISRQLIDIMGGQLYVSSQPMVGTTFSFTLPLATEEDKAKTRLANNAHFAVPRVELDQTDYTQLPENPDGPLIL
VVDDEPVNLQVLNNFLRLEGYRVKAVENGRQAIESVTMEKPALMLLDVMMPELSGYEVCTHLRERYGRADLPIIMLSALG
QVQDKVKGFDAGANDYLTKPFNKDELSARIRAYINASLTEQEREHNRTLQKEIHFREQVEAGLREVQNKLLGMLDSASEG
IICVQDNGRISYANDACSEIFRLSAEQIERHQLEDFLAMALPEPESARGHYSGQFRFKVDGDIVDIDTDLITLPESSGLQ
MMLILNTGKRASSHRVQLLENAVSALSDYAYDGDMEKLQQLRELGGEFTRMADRFSGSKPDKADILRDTLVKVMSATLNF
WQNSTGKTKFDLAEESGLWRVYLDRSTLQTRTLDKYLHVETVPKSPRWRTVISTIDFVLERCIEENKERNELEVLRERLQ
TLISK

Nucleotide

• Length: 3378 bp

>NTDB_id=600817 K6Q96_RS14465 WP_251876586.1 3215517..3218894(+) (chiS) [Grimontia kaedaensis strain 020920N]
ATGCAAAAAAAACAGAAATTCAAACGACTTCAGCATACGCTGATGTTGGCTTTTCTGGTGCTGAGTATCACGCCTCTCAC
CCTGTTGGCGATTTTCTTCCTTGAATCTCACAGCAGCGATCTTGAACAACAAAGCACCACACACCTTTCTTTTCTACGTG
ACAACAAAAAAGAGCAAATAATCAGCTACTTTGATGCCCGTCACTCAGAGGTCAAATCCTTTAGCCGCTCAGAACTTGCG
ACCGCCAGTGGCGGGCGCTTCTACGGTTTAATCGCAGCATTCCAACAGCTAGGCGACACAGAAGAAATGGCCCGCAACGT
TGCCCGGGAACGCTATGGTGCCGATTCAAACGCCACGCTACCACCCGGCGCTAACGACAGCAATTTCATTGGCAGCGAGC
GATATCGCCTGCTGCATAAGCGCTATGACTGGGCCTATAAAGAACACCTGAAGCGTTCTGATTTTTCAGATATTTTGCTG
GTCGATATTCATGGCAACGTGGTTTATTCTACGTTAAAAGATGACGCTTTTGGCTCAAACCTGCTTTCTGAAAAGTGGCG
TGAAACCGCTGTCGGTAAAACGTTCTCGGACATCAGAGAGGCGGTCGATTCCCCACTGACAGATAGTGAAAATACACCGA
TCGCTTTTACCGACTACACCCAACAAGCCGATGGTGAAATGGTGGCGTGGTTTGCCGCACCTATCATGCAGCAGGGCTAC
CTGCACAGCTATGTGCTGTTCAAATTGCCAAACAATGCGTTGGATAAAATGCTCAACTCAACCCCCCAGGAGAAGGGCTA
CATTAGTACCCTGTTGGTGGGCAATGACCTTATCCCTCGTAATCTGGTGACGACAGAGATACTGGCACCGATTAACAGTA
CCGCGATTGAAGCGGCTCTCGCAGGTCTTCGTGATGTCGGCAGTTTCCTGAGTCCGGAGAATCACCGCGTATTGGGTGCC
TATGCGCCAGTTGATATTCCGGGTACTTCCTGGGCGATCGTCCTCGAACTGCCGGAAGAGGAAGCATTCGCCCGCATCTA
CCAATTGGAGAAAATCTTCATTGCGGTCATGGTCATTGCCATTTTGTTGGTAGTGATTGCTTCACACATGCTGTCTAACT
CTATCACGGCACCTTTGCTCAAACTGACCTGGGCCGCTGAGCAAGTTTCTGCCGGCGATTTGGAACAAAAAATTAACAGT
ACAGACCGTGACGATGAGATTGGTAGACTGGCTGTCAGTTTTGCGCGCATGCAACGCTCAATTCGAGACAAGCTGGCCCT
TATCCGCGAACAAAATAAAGAGCTCGAACAAAACATTCAGGTCATCAAGCAAAAGAATGAAGAGCTTCAACAAGCCGACC
GCATGAAAGATGACTTTCTGGCGACAACCTCTCATGAGCTGCGTACACCGCTCCACGGCATGGTGGGGATTGCCGAGTCC
ATACTTGCTGGCGCTGAAGGCCCGCTGCCAGAACGCCAAAAACATCAGCTCCAAATGATCATTAACAGTGGCGAGCGTCT
CTCAAATCTGGTGGATGATTTGCTTGATTACCACAAGATGCGTTACGGCGAACTTGAAATCTCTCCACAGGCTGTCGACA
CCGCCAATGCGGTGAGACTGGTTATCGAGCTCTCCAGTCACCTTTTAGGTGGAAAACCCGTGCGCATTATTAACCAGGTG
CCTATCGACTTACCGTTGGTTCGTGCCGATGAACAACGTCTGGAGCAGGTTCTGTATAACCTTATTGGTAATGCAATCAA
ATACACCGACGAAGGCAAAATCATTATTTCTGCCACCGTATTAGAAGGTCAGCTTCGCATTCAGGTGGTAGATACTGGTC
AGGGAATCCCATCCGACCAACTCGAGTACATCTTCGAACCTTTGACCCAAGCAAGTGGCAACGCTGCACAATACCGGCAG
GGCGCAGGCCTTGGGTTATCTATCAGCCGCCAGCTAATCGACATTATGGGGGGCCAGCTCTACGTATCCAGTCAACCAAT
GGTAGGCACTACGTTCAGCTTCACTTTGCCGTTGGCCACTGAAGAAGACAAAGCGAAAACGCGCCTTGCCAATAATGCGC
ACTTCGCCGTACCTCGTGTAGAGCTGGATCAGACAGATTACACCCAGTTACCGGAAAACCCCGATGGACCGTTGATCTTG
GTAGTAGACGATGAACCGGTAAATCTGCAGGTACTCAATAACTTCCTGCGCCTTGAAGGTTATCGGGTAAAAGCCGTCGA
AAATGGCCGTCAGGCGATTGAGTCCGTCACTATGGAAAAGCCAGCCCTGATGCTGCTGGATGTCATGATGCCGGAGCTCA
GTGGCTATGAAGTATGTACTCACCTGCGAGAGCGATACGGTCGGGCTGATCTGCCTATTATTATGCTTTCGGCGTTAGGT
CAGGTGCAGGATAAAGTGAAGGGGTTTGATGCCGGTGCCAACGATTACCTGACAAAACCCTTCAACAAAGACGAACTCAG
TGCTCGTATACGAGCTTACATCAATGCATCGCTGACTGAGCAGGAGCGCGAGCACAACCGCACTCTGCAGAAAGAAATTC
ATTTTCGTGAGCAAGTTGAAGCTGGTCTTCGAGAAGTACAGAACAAACTGCTTGGCATGCTGGATAGCGCCTCTGAAGGT
ATTATCTGTGTGCAGGATAATGGACGGATCAGTTACGCCAATGATGCATGCAGCGAAATATTCCGCCTTAGTGCCGAACA
AATTGAGCGCCACCAGCTTGAAGATTTCTTAGCGATGGCATTGCCTGAACCAGAGTCCGCTCGAGGTCATTACAGCGGCC
AATTCAGGTTTAAAGTCGATGGGGACATCGTTGATATTGATACGGATTTAATCACCCTACCCGAATCATCTGGTCTGCAG
ATGATGCTAATCCTCAACACAGGGAAGAGAGCTTCTTCGCATCGGGTACAGCTTTTGGAAAACGCCGTATCTGCACTATC
AGACTATGCCTATGATGGCGATATGGAAAAACTTCAGCAGCTCCGTGAGCTTGGCGGAGAGTTCACCAGAATGGCTGACC
GTTTCTCAGGTAGTAAGCCCGACAAAGCTGACATACTGAGAGATACGCTGGTCAAAGTGATGAGTGCTACCTTAAACTTT
TGGCAAAACTCCACAGGTAAAACCAAGTTTGATCTTGCAGAGGAGAGCGGACTTTGGCGAGTCTATCTTGACCGAAGTAC
CTTGCAAACACGAACGCTCGACAAATACCTCCATGTCGAAACCGTTCCAAAATCTCCGCGCTGGCGAACAGTCATTAGTA
CCATCGATTTTGTCCTTGAGCGCTGCATAGAAGAAAACAAAGAAAGAAACGAGCTTGAAGTGCTCAGAGAAAGGCTTCAG
ACGTTGATTTCAAAATAA

Domains

Predicted by InterproScan.

• His Kinase A (phospho-acceptor) domain (HisKA) (455-521)

• Response regulator receiver domain (Response_reg) (719-831)

• HAMP domain (HAMP) (371-423)

• PAS domain (PAS_8) (872-927)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (570-679)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	56.625	100	0.57