Detailed information NTG0600790

Bioinformatically predicted

Overview

• Name: pilC
• Type: Machinery gene
• Locus tag: NDQ64_RS10195
• Genome accession: NZ_CP098544
• Coordinates: 1932901..1936008 (+)
• Length: 1035 a.a.
• NCBI ID: WP_260244337.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain 10296
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1927901..1941008

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NDQ64_RS10175 (NDQ64_10070)	-	1928598..1929047 (-)	450	WP_003692085.1	CopD family copper resistance protein	-
NDQ64_RS10180 (NDQ64_10075)	waaA	1929088..1930359 (-)	1272	WP_010360974.1	lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase	-
NDQ64_RS10185 (NDQ64_10080)	gnd	1930422..1931870 (-)	1449	WP_003688061.1	decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase	-
NDQ64_RS10190 (NDQ64_10085)	-	1931950..1932213 (-)	264	WP_017147189.1	hypothetical protein	-
NDQ64_RS10195 (NDQ64_10090)	pilC	1932901..1936008 (+)	3108	WP_260244337.1	PilC family type IV pilus tip adhesin	Machinery gene
NDQ64_RS10200 (NDQ64_10095)	-	1936661..1936945 (+)	285	WP_003692093.1	GIY-YIG nuclease family protein	-
NDQ64_RS10205 (NDQ64_10100)	yccS	1937429..1939579 (-)	2151	WP_003697785.1	YccS family putative transporter	-
NDQ64_RS10210 (NDQ64_10105)	pilU	1939696..1940922 (-)	1227	WP_003697786.1	PilT/PilU family type 4a pilus ATPase	Machinery gene

Sequence

Protein

• Length: 1035 a.a.
• Molecular weight: 112935.17 Da
• Isoelectric Point: 9.9634

>NTDB_id=600790 NDQ64_RS10195 WP_260244337.1 1932901..1936008(+) (pilC) [Neisseria gonorrhoeae strain 10296]
MNKTLKRQVFRHTALYTAILMFSHTGGGGGGGGQAQARDYAIIMNGRNQPEVKSNVPSSIKDKDRKRTFSHTSQTNWRGQ
QNNFISFDNSDELVSQQSGTAVFGTATYLPPYGKVSGFDTDRLKKRNNAVDWIRTTRIALAGYSYEGVVCRSGTGCPKLV
YKTRFSFDNPDLVKNAGKLDRYTDLSRENSPIYKLKDYPWLGVSFNLSSENTVKDSKLSNKLISSFSESNNNQTIVSTTE
DHPISLGGSQREHTAVAYYLNAKLHLLDKKGIGDIAPGKTVRLGLLKPSIDVRKGNTGLSGILSFNATWDIKDTGQIPVK
LGLQVKAGRCINKPNPNKNTKAPSPALTAPALWFGPRQDGKVQMYSASVSTYPDSSSSKIFLQNLSRNDDKNKPGRYSLK
PLSENEIKSKEPRFNGRQTVIRLDSGVQLIKLNGSKDEVVIFGNNGNNGTFGIVKEANVNLEADEWKKVLLPWTVRGPDN
DNKFKLINQKPDRYSQRYRIRENGNRDLGDIVNSPIVAVGGYLATSANDGMVHIFKKTGTDERSYNLKLSYIPGTMERKD
IEGNDSDLAKELRTFAEKGYVGDRYGVDGGFVLRQVNLNGQDRVFMFGAMGLGGRGAYALDLSKINENYPAAAPLFDVKN
GDKNGKNGKNRVEVELGYTVGTPQIGKTRSGKYAAFLASGYAAKDIGSGDNKTALYVYDLNNTLGTPIAKIEVKDGKGGL
SSPTLVDKDLDGTVDIAYAGDRGGNMYRFDLSNSDPNKWSVRTIFEGTKPITSAPAVSRLKDKRVVIFGTGSDLTEDDVL
DTKEQYIYGIFDDDKAANNVNASRGVLGSGLLEQHLTQENKTLFLNKRSDGSGSKGWAVKLTGGRRVTVKPTVVLRTAFV
TIRKYKDDGCGAETAILGINTADGGALTPRSARPIVPDHNSVAQYSGHKKTAGGKSVPIGCMEKGGKTVCPNGYVYDKPV
NVRYLDETETDGFSTTADGDAGGSGIDPAGRRPGKNNRCFSKKGVRTLLMNDLDSLDITGPMCGIKRLSWREVFF

Nucleotide

• Length: 3108 bp

>NTDB_id=600790 NDQ64_RS10195 WP_260244337.1 1932901..1936008(+) (pilC) [Neisseria gonorrhoeae strain 10296]
ATGAATAAAACTTTGAAACGGCAGGTTTTCCGCCATACCGCGCTTTATACCGCCATATTGATGTTTTCCCATACCGGCGG
GGGGGGGGGGGGGGGGGGGCAGGCGCAAGCCCGTGACTACGCTATTATCATGAACGGGCGAAACCAGCCCGAGGTAAAGT
CGAATGTGCCATCTTCAATAAAGGACAAAGACAGGAAGCGGACATTTAGCCATACGAGCCAGACAAACTGGCGGGGCCAA
CAAAACAATTTTATCTCATTCGACAATAGCGATGAGCTTGTTTCTCAACAAAGCGGTACTGCCGTTTTTGGCACAGCCAC
CTACCTGCCGCCCTACGGCAAGGTTTCCGGTTTTGATACCGATAGGCTGAAAAAGCGCAACAATGCCGTTGATTGGATTC
GTACCACCCGCATCGCGCTGGCAGGCTACAGCTACGAAGGTGTCGTATGCAGAAGCGGCACAGGCTGTCCCAAACTTGTC
TATAAAACCCGATTTTCCTTCGATAATCCCGACTTGGTAAAAAATGCGGGCAAGCTGGATAGGTACACAGACCTAAGCCG
CGAAAATTCGCCCATTTACAAATTGAAGGATTATCCATGGTTGGGCGTATCTTTCAATTTGAGCAGCGAGAATACCGTCA
AAGATAGCAAATTATCCAACAAATTGATATCTTCTTTTAGTGAAAGCAATAATAATCAAACCATCGTCTCTACGACAGAA
GACCACCCTATTTCCCTTGGCGGCTCGCAGCGCGAACATACCGCCGTGGCCTATTATCTGAACGCCAAACTGCACCTGCT
GGATAAAAAAGGGATTGGAGATATCGCGCCAGGCAAAACAGTGCGGTTGGGTCTCTTGAAGCCGAGCATCGATGTGCGGA
AAGGAAATACGGGGCTTAGCGGCATTCTATCTTTTAATGCTACGTGGGACATTAAAGATACCGGGCAGATTCCGGTCAAG
CTCGGCCTGCAAGTCAAAGCAGGCCGCTGCATCAATAAACCGAACCCCAATAAGAATACCAAAGCCCCTTCGCCGGCACT
GACCGCCCCCGCGCTGTGGTTCGGACCTAGGCAAGATGGTAAGGTGCAGATGTATTCCGCTTCGGTTTCCACCTACCCCG
ACAGTTCGAGCAGCAAAATTTTCCTGCAAAACCTTTCCCGCAATGATGACAAAAACAAACCGGGCCGCTATTCCCTCAAA
CCCTTGAGTGAGAATGAGATTAAAAGTAAAGAGCCGCGTTTCAACGGAAGGCAGACCGTCATCCGATTGGATAGCGGCGT
ACAGCTGATCAAACTGAATGGAAGCAAGGATGAGGTCGTCATTTTTGGAAACAACGGCAACAACGGCACTTTCGGCATTG
TTAAGGAAGCGAACGTCAATCTTGAAGCCGACGAGTGGAAAAAAGTGCTGCTGCCTTGGACGGTTCGGGGTCCCGATAAT
GACAATAAATTTAAATTAATTAACCAAAAACCAGACAGATACAGCCAAAGATACCGCATCCGCGAAAACGGCAATCGCGA
TTTGGGCGACATCGTCAACAGCCCGATTGTCGCGGTCGGCGGGTATCTGGCAACTTCTGCCAACGACGGGATGGTGCATA
TCTTCAAAAAAACCGGCACGGATGAACGCAGCTACAATCTGAAGCTCAGCTACATCCCCGGTACGATGGAGCGTAAGGAT
ATTGAAGGCAATGACTCCGACCTCGCCAAAGAGCTGCGCACCTTTGCCGAAAAAGGCTATGTGGGCGACCGCTACGGCGT
GGACGGCGGCTTTGTCTTGCGTCAAGTTAACTTAAACGGACAAGACCGCGTGTTTATGTTCGGCGCAATGGGCCTTGGCG
GCAGAGGCGCATACGCCTTGGATTTAAGCAAAATCAACGAAAATTATCCAGCCGCCGCTCCCCTGTTTGATGTCAAAAAT
GGCGATAAAAACGGCAAAAACGGCAAAAATCGCGTGGAAGTGGAATTAGGCTACACCGTCGGTACGCCGCAAATCGGCAA
AACCCGCAGCGGCAAATACGCCGCCTTCCTCGCTTCCGGTTATGCGGCTAAAGATATTGGCAGCGGCGATAATAAAACCG
CGCTGTATGTATATGATTTGAACAACACCTTAGGTACGCCGATTGCAAAAATCGAAGTGAAGGACGGCAAAGGCGGGCTT
TCGTCCCCCACGCTGGTGGATAAAGATTTGGACGGCACGGTCGATATCGCCTATGCCGGCGACCGGGGCGGCAATATGTA
CCGCTTTGATTTGAGCAATTCCGATCCTAATAAATGGTCTGTAAGGACTATTTTCGAAGGCACAAAACCGATTACCTCCG
CGCCCGCCGTTTCCCGACTGAAAGACAAACGCGTCGTCATCTTCGGTACGGGCAGCGATTTGACCGAAGATGATGTACTC
GATACGAAAGAACAATATATTTACGGTATCTTTGACGACGATAAGGCGGCGAATAATGTAAATGCAAGCCGCGGCGTTTT
GGGGAGCGGGCTGCTCGAGCAACACCTTACTCAGGAAAATAAAACATTATTCCTGAACAAGAGATCCGACGGTTCGGGCA
GCAAGGGCTGGGCGGTGAAATTGACAGGCGGACGGCGCGTTACCGTCAAACCGACCGTGGTATTGCGTACCGCCTTCGTA
ACCATCCGCAAATATAAAGACGACGGCTGCGGCGCGGAAACCGCCATTTTGGGCATCAATACCGCCGACGGCGGCGCATT
GACTCCGAGAAGCGCGCGCCCGATTGTGCCGGATCACAATTCGGTTGCGCAATATTCCGGCCATAAGAAAACCGCCGGCG
GCAAGTCCGTCCCTATAGGTTGTATGGAAAAAGGCGGTAAAACCGTCTGCCCGAACGGATATGTTTACGACAAGCCGGTT
AATGTGCGTTATCTGGATGAAACGGAAACAGACGGATTTTCAACGACGGCGGACGGCGATGCGGGCGGCAGCGGTATAGA
CCCCGCCGGCAGGCGTCCCGGCAAAAACAACCGCTGCTTCTCCAAAAAAGGTGTGCGCACCCTGCTGATGAACGATTTGG
ACAGCTTGGATATTACCGGCCCGATGTGCGGTATCAAACGCTTAAGCTGGCGCGAAGTCTTCTTCTGA

Domains

Predicted by InterProScan.

• Neisseria PilC beta-propeller domain (T4P_PilY1) (508-846)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilC	Neisseria meningitidis A1493	72.469	100	0.74