Detailed information NTG0600760

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: K6I41_RS10360
• Genome accession: NZ_CP082274
• Coordinates: 2222658..2223413 (-)
• Length: 251 a.a.
• NCBI ID: WP_250374249.1
• Uniprot ID: -
• Organism: Acinetobacter sp. AS23
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2217658..2228413

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6I41_RS10330 (K6I41_10255)	-	2217969..2218409 (-)	441	WP_013198075.1	SRPBCC family protein	-
K6I41_RS10335 (K6I41_10260)	tadA	2218478..2218981 (-)	504	WP_004792719.1	tRNA adenosine(34) deaminase TadA	-
K6I41_RS10340 (K6I41_10265)	-	2218986..2220110 (-)	1125	WP_111853773.1	enoyl-CoA hydratase/isomerase family protein	-
K6I41_RS10345 (K6I41_10270)	ung	2220107..2220820 (-)	714	WP_250374247.1	uracil-DNA glycosylase	-
K6I41_RS10350 (K6I41_10275)	-	2220874..2221470 (-)	597	WP_004792725.1	6-carboxytetrahydropterin synthase	-
K6I41_RS10355 (K6I41_10280)	gspK	2221699..2222658 (-)	960	WP_250374248.1	type II secretion system minor pseudopilin GspK	-
K6I41_RS10360 (K6I41_10285)	xcpW	2222658..2223413 (-)	756	WP_250374249.1	type II secretion system minor pseudopilin GspJ	Machinery gene
K6I41_RS10365 (K6I41_10290)	xcpV	2223413..2223793 (-)	381	WP_250374250.1	type II secretion system minor pseudopilin GspI	Machinery gene
K6I41_RS10370 (K6I41_10295)	-	2223783..2224337 (-)	555	WP_005304714.1	type II secretion system protein	-
K6I41_RS10375 (K6I41_10300)	-	2224347..2224955 (-)	609	WP_013198082.1	TetR/AcrR family transcriptional regulator	-
K6I41_RS10380 (K6I41_10305)	-	2224992..2225765 (-)	774	WP_250374251.1	TatD family hydrolase	-
K6I41_RS10385 (K6I41_10310)	-	2225783..2226124 (-)	342	WP_003651467.1	PilZ domain-containing protein	-
K6I41_RS10390 (K6I41_10315)	-	2226135..2227115 (-)	981	WP_250374252.1	DNA polymerase III subunit delta'	-
K6I41_RS10395 (K6I41_10320)	kdsB	2227129..2227890 (-)	762	WP_199942173.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 251 a.a.
• Molecular weight: 28741.03 Da
• Isoelectric Point: 9.7026

>NTDB_id=600760 K6I41_RS10360 WP_250374249.1 2222658..2223413(-) (xcpW) [Acinetobacter sp. AS23]
MIKNKYLRSRSPVSHLAARSEQMMRGYSEHSSSSCAQTKLRFVNPRSGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRD
RNAQHEVQLFELQDAYQQILRDTLQIIPLSANQGGQLRPALELDNQVLHFSKAGVTDPLKQGLSPFERIEYRYDPDQKKL
YRLKYSNLNTSNREQPLSSTLLSQVEQFQIMVLTPQEVTKWPEINIDPTKPEEFRKLPKGIKIQLTVAGVSYEWIYSLNQ
GDLSLSNKGVG

Nucleotide

• Length: 756 bp

>NTDB_id=600760 K6I41_RS10360 WP_250374249.1 2222658..2223413(-) (xcpW) [Acinetobacter sp. AS23]
ATGATAAAAAATAAATATCTTCGCTCGAGAAGTCCAGTTTCTCATCTTGCTGCACGATCGGAGCAGATGATGAGAGGTTA
CTCCGAGCACAGCTCTTCGTCTTGCGCTCAGACAAAGCTTCGCTTTGTTAATCCTCGCTCAGGATTTACTTTAGTTGAGC
TTTTAGTCGCAATTGCAATTTTTGCTGTTCTATCTTTGTTGGGTTGGAAGATTTTTGATTATTTATTAAAAGTCCGTGAT
CGTAATGCACAACACGAAGTGCAGTTATTTGAATTACAAGATGCTTATCAACAAATTTTACGTGATACGTTGCAAATTAT
ACCTTTATCGGCTAATCAAGGCGGGCAACTACGTCCAGCTTTAGAACTTGATAATCAAGTTCTTCACTTTAGCAAGGCAG
GTGTTACGGACCCCTTAAAGCAAGGGTTATCACCTTTTGAGCGTATCGAATATCGATATGATCCTGATCAAAAAAAGCTT
TATCGTCTTAAGTATAGTAATTTAAATACTTCAAACAGAGAGCAACCACTATCAAGTACGCTGTTGAGCCAAGTTGAACA
ATTTCAAATTATGGTACTCACGCCTCAAGAAGTGACAAAGTGGCCAGAAATTAATATTGATCCTACAAAACCTGAAGAAT
TTAGAAAGTTGCCGAAAGGAATAAAAATACAACTCACAGTTGCTGGTGTAAGTTATGAGTGGATTTATAGCTTAAATCAA
GGTGATTTATCGCTCTCCAATAAAGGAGTGGGATAG

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (101-230)

• Prokaryotic N-terminal methylation motif (N_methyl) (45-67)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	81.526	99.203	0.809