Detailed information NTG0600577

Bioinformatically predicted

Overview

• Name: pilC
• Type: Machinery gene
• Locus tag: NDQ63_RS10190
• Genome accession: NZ_CP098536
• Coordinates: 1948452..1951412 (-)
• Length: 986 a.a.
• NCBI ID: WP_311201966.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain 10771
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1943452..1956412

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NDQ63_RS10180 (NDQ63_10100)	yccS	1944629..1946779 (+)	2151	WP_003692098.1	YccS family putative transporter	-
NDQ63_RS10185 (NDQ63_10105)	-	1947261..1947545 (-)	285	WP_003692093.1	GIY-YIG nuclease family protein	-
NDQ63_RS10190 (NDQ63_10110)	pilC	1948452..1951412 (-)	2961	WP_311201966.1	PilC family type IV pilus tip adhesin	Machinery gene
NDQ63_RS11820	pilC	1951412..1951540 (-)	129	WP_263071070.1	hypothetical protein	Machinery gene
NDQ63_RS10195 (NDQ63_10115)	-	1952227..1952490 (+)	264	WP_229433460.1	hypothetical protein	-
NDQ63_RS10200 (NDQ63_10120)	gnd	1952570..1954018 (+)	1449	WP_003688061.1	decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase	-
NDQ63_RS10205 (NDQ63_10125)	waaA	1954081..1955352 (+)	1272	WP_010360974.1	lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase	-
NDQ63_RS10210 (NDQ63_10130)	-	1955393..1955842 (+)	450	WP_229930593.1	CopD family copper resistance protein	-

Sequence

Protein

• Length: 986 a.a.
• Molecular weight: 108027.73 Da
• Isoelectric Point: 9.7849

>NTDB_id=600577 NDQ63_RS10190 WP_311201966.1 1948452..1951412(-) (pilC) [Neisseria gonorrhoeae strain 10771]
MNAQNQPEVKSNVPYSIKDKDRKRVFDYTSQKSSLGRTNNFISFNNNDEVVARKNGTAVFGTATYLPPYGKVSGFDADAL
KERANAVDWIRTTRPGLAGYAYTDVICRDAGQCPQLVYETKFAFGQQGLQRNGNKLDIYEDKSRDNSPIYKLKDYPWLGV
SFNLGSENTVKNGRSSGRLISSFSENNNNQTIVSTTRDRPISLGDRQREHTAVAYYLNAKLHLLDKKRIKDIAQGKTVDL
GTLRPRVETTGRNWLSYWATWDIKDTGQIPVKLGLPEVKAGRCINKPNPNPKSALSPALTAPALWFGPVQNGKVQMYSAS
VSTYPGSSSSRIFLQELKTQTEPGKPGRYSLKSLNDGEIKSRQPSFNGRQTIIRLDDGVHLIKLNGSKDEVAAFVNLNGN
NTGKNDTFGIVKEANVNLEADEWKKVLLPWTVRGPDNDNKFKSINQKPEKYSQRYRIRDNNGNRDLGDIVNSPIVAVGGY
LATSANDGMVHIFKKTGTDQRGYELKLSYIPGTMPRKDIESNDSTLAKELRAFAEKGYVGDRYGVDGGFVLRQVEDRVFM
FGAMGLGGRGAYALDLSKTNGNYPAAAPLFDVKDGDKKGKNRVEVELGYTVGTPQIGKTQNGTYSAFLASGYAAKQIDDS
TNKTALYVYDLKDTLGTPIAKIEVKDGKGGLSSPTLVDKDLDGIVDIAYAGDRGGNMYRFDLSGDNPSKWTVRTIFQGTK
PITSAPAVSRLADKRVVIFGTGSDLSEQDVVDKDQQYIYGIFDDDKGTVKVTVQNGTGGGLLEQVLKEENKTLFLNKGSD
GSGSKGWVVKLKEGQRVTVKPTVVLRTAFVTIRKYKDDGCGADTAILGINTADGGALTPRSARPIVPEANKDVAQYSGHK
TTSKGKSIPIGCMEKGGKTVCPNGYVYDKPVNVRYLDEKKTDDFPVTADGDAGGSGIDPAGRRPGKNNRCFSKKGVRTLL
MNDLDSLDITGPMCGIKRLSWREVFF

Nucleotide

• Length: 2961 bp

>NTDB_id=600577 NDQ63_RS10190 WP_311201966.1 1948452..1951412(-) (pilC) [Neisseria gonorrhoeae strain 10771]
ATGAACGCGCAAAACCAGCCCGAGGTAAAGTCGAATGTGCCATATTCAATAAAGGACAAAGACAGGAAGCGGGTATTTGA
CTATACGAGCCAGAAAAGCAGCTTAGGCAGGACAAACAATTTTATCTCATTCAACAATAACGATGAAGTTGTTGCTCGAA
AAAACGGTACTGCCGTTTTTGGCACAGCCACCTACCTGCCGCCCTACGGCAAGGTTTCCGGTTTTGATGCCGACGCTCTG
AAAGAGCGCGCCAATGCCGTTGATTGGATTCGTACCACCCGGCCCGGGCTGGCAGGCTACGCCTACACCGACGTCATATG
CAGAGACGCAGGGCAATGCCCCCAACTTGTCTATGAGACCAAATTTGCCTTCGGTCAACAAGGGTTGCAAAGAAATGGCA
ACAAGCTGGATATATACGAAGACAAAAGCCGCGACAATTCGCCCATTTACAAATTGAAGGATTATCCATGGTTGGGCGTA
TCTTTCAATTTGGGCAGCGAGAATACCGTCAAAAATGGCAGATCATCCGGCAGATTGATATCTTCTTTTAGTGAAAACAA
TAATAATCAAACCATCGTCTCTACGACACGAGACCGCCCTATTTCCCTTGGCGACCGGCAGCGCGAACATACCGCCGTGG
CCTATTATCTGAACGCCAAGCTGCACCTGCTGGACAAAAAAAGGATTAAAGATATCGCCCAAGGCAAAACAGTGGATTTG
GGCACCTTGAGACCGCGCGTCGAGACGACAGGACGAAACTGGCTAAGTTATTGGGCTACGTGGGACATTAAAGATACCGG
GCAGATTCCGGTCAAGCTCGGCCTGCCGGAAGTCAAAGCAGGCCGCTGCATCAACAAACCGAACCCCAATCCCAAATCAG
CCCTTTCGCCGGCACTGACCGCCCCCGCGCTGTGGTTCGGCCCTGTGCAAAATGGCAAGGTGCAGATGTATTCCGCTTCG
GTTTCTACCTACCCCGGCAGTTCGAGCAGCCGCATCTTCCTCCAAGAGCTGAAAACTCAAACCGAACCCGGCAAACCCGG
CCGCTATTCCCTCAAATCTTTGAATGATGGTGAGATTAAAAGTCGACAGCCGAGTTTCAACGGGCGGCAAACAATCATCC
GATTGGATGACGGCGTACATTTGATCAAACTGAATGGAAGCAAGGATGAGGTCGCCGCTTTTGTCAATTTAAATGGAAAC
AACACCGGCAAAAACGACACTTTCGGCATTGTTAAGGAAGCGAACGTCAATCTTGAAGCTGACGAGTGGAAAAAAGTGCT
GCTGCCTTGGACGGTTCGGGGTCCCGATAATGACAATAAATTTAAATCAATTAACCAAAAACCAGAAAAATACAGCCAAA
GATACCGCATCCGCGACAACAACGGCAATCGCGATTTGGGCGACATCGTCAACAGCCCGATTGTCGCGGTCGGCGGGTAT
CTGGCAACTTCTGCCAACGACGGGATGGTGCATATCTTCAAAAAAACCGGCACAGACCAACGAGGCTACGAACTGAAGCT
CAGCTACATCCCGGGTACGATGCCGCGCAAGGATATTGAAAGCAACGATTCTACACTCGCCAAAGAGCTGCGCGCCTTTG
CCGAAAAAGGCTATGTGGGCGACCGCTACGGCGTGGACGGCGGCTTTGTCTTGCGTCAAGTTGAAGACCGCGTGTTTATG
TTCGGCGCGATGGGTTTGGGCGGCAGGGGCGCGTATGCCTTGGATTTAAGCAAAACCAACGGCAATTATCCAGCCGCCGC
TCCCCTGTTTGATGTCAAAGATGGCGATAAGAAAGGCAAAAATCGCGTGGAAGTGGAATTAGGCTACACCGTCGGCACGC
CGCAAATCGGCAAAACCCAAAACGGCACATACTCCGCCTTCCTCGCTTCCGGTTATGCGGCTAAACAAATTGACGACTCA
ACAAATAAAACCGCGCTGTATGTGTATGATTTGAAAGACACCTTAGGTACGCCGATTGCAAAAATCGAAGTGAAGGACGG
CAAGGGCGGGCTTTCGTCCCCCACGCTGGTGGATAAAGATTTGGACGGCATTGTCGATATCGCCTATGCCGGCGACCGGG
GCGGCAATATGTACCGCTTTGATTTGAGCGGCGACAATCCGTCCAAATGGACTGTACGCACTATTTTCCAAGGCACAAAA
CCGATTACCTCCGCGCCCGCCGTTTCCCGACTGGCAGACAAACGCGTGGTCATCTTCGGTACGGGCAGCGATTTGAGTGA
ACAGGATGTAGTCGATAAGGATCAACAATATATTTACGGTATCTTTGACGACGATAAGGGGACGGTTAAGGTAACGGTAC
AAAACGGCACGGGAGGCGGGCTGCTCGAGCAAGTGCTTAAAGAGGAAAATAAAACATTATTCCTGAACAAGGGATCCGAC
GGATCGGGCAGTAAGGGGTGGGTAGTGAAGCTGAAGGAAGGACAGCGCGTTACCGTCAAACCGACCGTGGTATTGCGTAC
CGCCTTCGTAACCATCCGCAAGTATAAAGACGACGGCTGCGGCGCGGATACCGCCATTTTGGGCATCAATACCGCCGACG
GCGGCGCATTGACTCCGAGAAGCGCGCGCCCGATTGTGCCGGAAGCCAATAAGGATGTCGCACAATATTCCGGCCATAAG
ACAACCTCCAAAGGCAAATCCATCCCTATAGGTTGTATGGAAAAAGGCGGTAAAACCGTCTGCCCGAACGGATATGTTTA
CGACAAGCCGGTTAATGTGCGTTATCTGGACGAAAAGAAAACAGACGATTTCCCCGTCACGGCAGACGGCGATGCGGGCG
GCAGCGGTATAGACCCCGCCGGCAGGCGTCCCGGCAAAAACAACCGCTGCTTCTCCAAAAAAGGTGTGCGCACCCTGCTG
ATGAACGATTTGGACAGCTTGGATATTACCGGCCCGATGTGCGGTATCAAACGCTTAAGCTGGCGCGAAGTCTTCTTCTG
A

Domains

Predicted by InterProScan.

• Neisseria PilC beta-propeller domain (T4P_PilY1) (466-795)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilC	Neisseria meningitidis A1493	71.627	100	0.732