Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | K7B00_RS13675 | Genome accession | NZ_CP082238 |
| Coordinates | 2673124..2674155 (-) | Length | 343 a.a. |
| NCBI ID | WP_009568264.1 | Uniprot ID | A0A2W1KN79 |
| Organism | Acidithiobacillus ferrooxidans strain BYM | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2668124..2679155
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K7B00_RS13645 (K7B00_13645) | hslV | 2668334..2668873 (+) | 540 | WP_009565976.1 | ATP-dependent protease subunit HslV | - |
| K7B00_RS13650 (K7B00_13650) | hslU | 2668876..2670198 (+) | 1323 | WP_012537366.1 | ATP-dependent protease ATPase subunit HslU | - |
| K7B00_RS13655 (K7B00_13655) | - | 2670221..2670553 (-) | 333 | WP_009568269.1 | hypothetical protein | - |
| K7B00_RS13660 (K7B00_13660) | rpoH | 2670550..2671410 (-) | 861 | WP_012537367.1 | RNA polymerase sigma factor RpoH | - |
| K7B00_RS13665 (K7B00_13665) | ftsX | 2671554..2672459 (-) | 906 | WP_009568267.1 | permease-like cell division protein FtsX | - |
| K7B00_RS13670 (K7B00_13670) | ftsE | 2672456..2673127 (-) | 672 | WP_009568266.1 | cell division ATP-binding protein FtsE | - |
| K7B00_RS13675 (K7B00_13675) | pilA | 2673124..2674155 (-) | 1032 | WP_009568264.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| K7B00_RS13680 (K7B00_13680) | rsmD | 2674278..2674847 (+) | 570 | WP_009568262.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| K7B00_RS13685 (K7B00_13685) | coaD | 2674840..2675364 (+) | 525 | WP_012537368.1 | pantetheine-phosphate adenylyltransferase | - |
| K7B00_RS13690 (K7B00_13690) | - | 2675393..2675644 (+) | 252 | WP_012537369.1 | YfhL family 4Fe-4S dicluster ferredoxin | - |
| K7B00_RS13695 (K7B00_13695) | - | 2675628..2677607 (-) | 1980 | WP_012537370.1 | dynamin family protein | - |
| K7B00_RS13700 (K7B00_13700) | mutM | 2677624..2678436 (-) | 813 | WP_009567582.1 | bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase | - |
Sequence
Protein
Download Length: 343 a.a. Molecular weight: 36809.09 Da Isoelectric Point: 6.8862
>NTDB_id=600409 K7B00_RS13675 WP_009568264.1 2673124..2674155(-) (pilA) [Acidithiobacillus ferrooxidans strain BYM]
MVFDWFKRNKSLPAGETFAEEVNSPATVATIPEDTPKGLFSRLRQGLARSREQLAGGVGRLVLGKKVIDADLLEELEALL
LQADLGSAATREVMDSVTERVRRNELTDPAALQAALRESLLDILRPRAQPWSPEKGHSQVLLMVGINGAGKTTTIGKLAA
RWKAEGFTVVLAAGDTFRAAAVEQLQGWGRRAQVPVVAQGTGADSASVIFDALTTTRARGSDLLIADTAGRLHTQGHLME
ELKKIRRVLGKQDPEAPQQIWLVLDAGTGQNALNQARQFHDAVGLTGICITKLDGTAKGGVVAAIAKALPIPIRYIGVGE
QVEDLRPFDPESFVDALFAESKS
MVFDWFKRNKSLPAGETFAEEVNSPATVATIPEDTPKGLFSRLRQGLARSREQLAGGVGRLVLGKKVIDADLLEELEALL
LQADLGSAATREVMDSVTERVRRNELTDPAALQAALRESLLDILRPRAQPWSPEKGHSQVLLMVGINGAGKTTTIGKLAA
RWKAEGFTVVLAAGDTFRAAAVEQLQGWGRRAQVPVVAQGTGADSASVIFDALTTTRARGSDLLIADTAGRLHTQGHLME
ELKKIRRVLGKQDPEAPQQIWLVLDAGTGQNALNQARQFHDAVGLTGICITKLDGTAKGGVVAAIAKALPIPIRYIGVGE
QVEDLRPFDPESFVDALFAESKS
Nucleotide
Download Length: 1032 bp
>NTDB_id=600409 K7B00_RS13675 WP_009568264.1 2673124..2674155(-) (pilA) [Acidithiobacillus ferrooxidans strain BYM]
ATGGTGTTCGACTGGTTCAAGCGTAACAAAAGCCTCCCTGCGGGGGAAACGTTCGCCGAAGAGGTGAACTCCCCTGCCAC
TGTGGCGACTATCCCGGAAGATACCCCCAAGGGACTTTTCTCTCGTCTTCGGCAAGGTCTGGCCCGCAGCCGGGAACAAC
TGGCCGGGGGTGTAGGGCGTCTGGTACTTGGTAAAAAGGTTATCGATGCCGATCTGCTGGAAGAACTGGAAGCCTTGCTG
CTACAGGCGGATCTCGGCAGCGCCGCAACCCGCGAAGTCATGGACAGCGTCACGGAGCGGGTGCGTCGCAACGAACTCAC
GGACCCCGCCGCGCTCCAGGCGGCACTGCGCGAGTCGCTTCTGGATATCCTGCGTCCCCGCGCACAACCCTGGTCGCCCG
AGAAGGGGCATTCTCAGGTGTTGCTCATGGTCGGTATCAACGGCGCAGGCAAAACGACCACCATCGGTAAACTGGCGGCA
CGCTGGAAGGCGGAAGGTTTCACGGTGGTGCTTGCTGCCGGGGACACCTTCCGCGCCGCTGCCGTCGAGCAGTTGCAGGG
CTGGGGGAGGCGCGCGCAGGTGCCGGTGGTGGCTCAGGGTACGGGCGCTGACAGCGCCTCCGTGATTTTCGATGCGCTGA
CCACGACCCGCGCGCGTGGCAGCGACCTGCTCATCGCCGATACCGCCGGGCGCCTCCACACCCAAGGCCATCTCATGGAA
GAGTTGAAGAAGATCAGGCGGGTTCTCGGCAAACAGGATCCGGAGGCGCCGCAGCAGATCTGGTTGGTGCTGGACGCCGG
GACGGGGCAGAACGCCCTCAATCAGGCACGTCAGTTTCATGACGCCGTGGGGCTGACGGGTATTTGCATCACCAAGCTGG
ATGGCACCGCCAAGGGGGGCGTGGTGGCGGCCATCGCCAAGGCCCTGCCCATCCCCATTCGCTACATTGGTGTCGGTGAG
CAGGTCGAAGACTTGCGTCCCTTTGACCCCGAATCCTTTGTCGATGCCTTGTTTGCGGAGTCGAAGTCATGA
ATGGTGTTCGACTGGTTCAAGCGTAACAAAAGCCTCCCTGCGGGGGAAACGTTCGCCGAAGAGGTGAACTCCCCTGCCAC
TGTGGCGACTATCCCGGAAGATACCCCCAAGGGACTTTTCTCTCGTCTTCGGCAAGGTCTGGCCCGCAGCCGGGAACAAC
TGGCCGGGGGTGTAGGGCGTCTGGTACTTGGTAAAAAGGTTATCGATGCCGATCTGCTGGAAGAACTGGAAGCCTTGCTG
CTACAGGCGGATCTCGGCAGCGCCGCAACCCGCGAAGTCATGGACAGCGTCACGGAGCGGGTGCGTCGCAACGAACTCAC
GGACCCCGCCGCGCTCCAGGCGGCACTGCGCGAGTCGCTTCTGGATATCCTGCGTCCCCGCGCACAACCCTGGTCGCCCG
AGAAGGGGCATTCTCAGGTGTTGCTCATGGTCGGTATCAACGGCGCAGGCAAAACGACCACCATCGGTAAACTGGCGGCA
CGCTGGAAGGCGGAAGGTTTCACGGTGGTGCTTGCTGCCGGGGACACCTTCCGCGCCGCTGCCGTCGAGCAGTTGCAGGG
CTGGGGGAGGCGCGCGCAGGTGCCGGTGGTGGCTCAGGGTACGGGCGCTGACAGCGCCTCCGTGATTTTCGATGCGCTGA
CCACGACCCGCGCGCGTGGCAGCGACCTGCTCATCGCCGATACCGCCGGGCGCCTCCACACCCAAGGCCATCTCATGGAA
GAGTTGAAGAAGATCAGGCGGGTTCTCGGCAAACAGGATCCGGAGGCGCCGCAGCAGATCTGGTTGGTGCTGGACGCCGG
GACGGGGCAGAACGCCCTCAATCAGGCACGTCAGTTTCATGACGCCGTGGGGCTGACGGGTATTTGCATCACCAAGCTGG
ATGGCACCGCCAAGGGGGGCGTGGTGGCGGCCATCGCCAAGGCCCTGCCCATCCCCATTCGCTACATTGGTGTCGGTGAG
CAGGTCGAAGACTTGCGTCCCTTTGACCCCGAATCCTTTGTCGATGCCTTGTTTGCGGAGTCGAAGTCATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
52.778 |
94.461 |
0.499 |