Detailed information NTG0060033

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: K6J62_RS02610
• Genome accession: NZ_AP018779
• Coordinates: 523066..524070 (-)
• Length: 334 a.a.
• NCBI ID: WP_005688661.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain CHBN-III-8 isolate 10H15
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 518066..529070

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
K6J62_RS02585 (CHBNIII8_04830)	tehA	519041..519985 (+)	945	WP_048950225.1	dicarboxylate transporter/tellurite-resistance protein TehA	-
K6J62_RS02590 (CHBNIII8_04840)	tsaA	520038..520757 (-)	720	WP_110431642.1	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	-
K6J62_RS02595 (CHBNIII8_04850)	menA	520819..521730 (+)	912	WP_042611151.1	1,4-dihydroxy-2-naphthoate octaprenyltransferase	-
K6J62_RS02600 (CHBNIII8_04860)	rraA	521782..522270 (+)	489	WP_005669389.1	ribonuclease E activity regulator RraA	-
K6J62_RS02605 (CHBNIII8_04870)	-	522405..522956 (-)	552	WP_005632696.1	TIGR00645 family protein	-
K6J62_RS02610 (CHBNIII8_04880)	cytR	523066..524070 (-)	1005	WP_005688661.1	substrate-binding domain-containing protein	Regulator
K6J62_RS02615 (CHBNIII8_04890)	rbsK	524098..525018 (-)	921	WP_110431643.1	ribokinase	-
K6J62_RS02620 (CHBNIII8_04900)	rbsB	525116..525994 (-)	879	WP_005639843.1	ribose ABC transporter substrate-binding protein RbsB	-
K6J62_RS02625 (CHBNIII8_04910)	rbsC	526014..526982 (-)	969	WP_005664522.1	ribose ABC transporter permease	-
K6J62_RS02630 (CHBNIII8_04920)	rbsA	526998..528479 (-)	1482	WP_011961660.1	ribose ABC transporter ATP-binding protein RbsA	-
K6J62_RS02635 (CHBNIII8_04930)	rbsD	528493..528912 (-)	420	WP_110431644.1	D-ribose pyranase	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36788.46 Da
• Isoelectric Point: 7.6607

>NTDB_id=60033 K6J62_RS02610 WP_005688661.1 523066..524070(-) (cytR) [Haemophilus influenzae strain CHBN-III-8 isolate 10H15]
MATMKDIARLAQVSTSTVSHVINGSRFVSDEIREKVMRIVAELNYTPSAVARSLKVRETKTIGLLVTATNNPFFAEVMAG
VEQYCQQHQYNLIIATTGGDAKRLQQNLQTLMHKQVDGLLLMCGDSRFQADIELTISLPLVVMDWWFTELNADKILENSA
LGGYLATKALIDAGHRKIGIITGNLKKSVAQNRLQGYKNALSEAKIALNPHWIVESHFDFEGGVLGIQSLLTQSSRPTAV
FCCSDTIAVGAYQAIQQQGLRIPQDLSIMGYDDIELARYLSPPLSTICQPKAELGKLAVEALLQRIKNPNENYRTLVLEP
TCILRGSISTPSNI

Nucleotide

• Length: 1005 bp

>NTDB_id=60033 K6J62_RS02610 WP_005688661.1 523066..524070(-) (cytR) [Haemophilus influenzae strain CHBN-III-8 isolate 10H15]
ATGGCGACAATGAAAGATATTGCACGACTGGCGCAAGTTTCGACTTCTACAGTTTCACATGTCATTAATGGATCGCGTTT
TGTTAGCGATGAAATTCGTGAGAAAGTGATGCGTATTGTCGCTGAACTGAATTACACCCCCTCAGCTGTTGCACGAAGTC
TTAAGGTGCGAGAAACCAAAACTATCGGGCTACTTGTCACCGCAACAAATAATCCATTCTTTGCGGAAGTGATGGCTGGC
GTGGAGCAATATTGTCAGCAGCATCAATATAATCTTATTATTGCCACCACTGGTGGCGATGCCAAACGCCTACAACAAAA
TCTGCAAACTCTAATGCACAAACAAGTGGATGGTTTGCTGTTGATGTGTGGTGATAGCCGTTTTCAGGCTGATATAGAGT
TAACCATTTCGCTGCCACTCGTTGTGATGGACTGGTGGTTTACTGAATTAAATGCAGATAAAATACTCGAAAATTCAGCA
CTTGGTGGCTATTTGGCGACAAAAGCATTAATTGATGCAGGACATCGTAAAATTGGCATTATTACGGGAAATCTCAAAAA
ATCTGTCGCACAAAATCGTTTGCAAGGTTATAAAAATGCGCTGTCGGAAGCAAAAATTGCGTTAAATCCTCATTGGATTG
TCGAAAGTCATTTTGACTTTGAAGGCGGTGTACTTGGCATACAATCTTTACTTACTCAATCTTCACGTCCAACAGCAGTT
TTTTGTTGTAGTGACACCATTGCTGTTGGTGCATACCAAGCTATTCAGCAACAAGGCTTACGTATTCCGCAAGATCTTTC
AATTATGGGCTATGATGACATTGAATTGGCTCGTTATCTCTCACCTCCCCTTTCCACCATTTGCCAACCGAAAGCTGAAC
TTGGCAAACTTGCTGTAGAAGCACTATTGCAACGAATTAAAAATCCTAATGAAAATTACCGCACTTTAGTGTTAGAGCCG
ACCTGTATTTTGAGAGGATCAATTTCTACCCCTTCAAACATATAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-327)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	37.048	99.401	0.368
cytR	Vibrio cholerae C6706	36.228	100	0.362