Detailed information NTG0600286

Bioinformatically predicted

Overview

• Name: pilC
• Type: Machinery gene
• Locus tag: NDL72_RS10290
• Genome accession: NZ_CP098505
• Coordinates: 1937693..1940806 (+)
• Length: 1037 a.a.
• NCBI ID: WP_263587421.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain 10536
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1932693..1945806

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NDL72_RS10270 (NDL72_10230)	-	1933390..1933839 (-)	450	WP_003692085.1	CopD family copper resistance protein	-
NDL72_RS10275 (NDL72_10235)	waaA	1933880..1935151 (-)	1272	WP_010360974.1	lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase	-
NDL72_RS10280 (NDL72_10240)	gnd	1935214..1936662 (-)	1449	WP_003688061.1	decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase	-
NDL72_RS10285 (NDL72_10245)	-	1936742..1937005 (-)	264	WP_017147189.1	hypothetical protein	-
NDL72_RS10290 (NDL72_10250)	pilC	1937693..1940806 (+)	3114	WP_263587421.1	PilC family type IV pilus tip adhesin	Machinery gene
NDL72_RS10295 (NDL72_10255)	-	1941459..1941743 (+)	285	WP_003692093.1	GIY-YIG nuclease family protein	-
NDL72_RS10300 (NDL72_10260)	yccS	1942227..1944377 (-)	2151	WP_003697785.1	YccS family putative transporter	-
NDL72_RS10305 (NDL72_10265)	pilU	1944494..1945720 (-)	1227	WP_003697786.1	PilT/PilU family type 4a pilus ATPase	Machinery gene

Sequence

Protein

• Length: 1037 a.a.
• Molecular weight: 113459.86 Da
• Isoelectric Point: 9.9355

>NTDB_id=600286 NDL72_RS10290 WP_263587421.1 1937693..1940806(+) (pilC) [Neisseria gonorrhoeae strain 10536]
MNKTLKRQVFRHTALYAAILMFSHTGGGGGGGAMAQTRQYAIVMNKRNQPEVKWDGQYQKSQLREKDGERKFIYTNQRNK
LGQQNNFISFDNTDELVSRQSGTAVFGTATYLPPYGKVSGFDTDRLKKRNNAVDWIRTTRIALAGYSYEGVVCRSGTGCP
KLVYKTRFSFDNPDLVKNAGKLDRYTDLSRENSPIYKLKDYPWLGVSFNLGAEGTDKDGRSPNKLVSSFDENNSNSNQNL
VYTTEGHPISLGGSQREHTAVAYYLNAKLHLLDKKGIGDIAPGKTVRLGLLKPSIDVRKGNTGLSGILSFNATWDIKDTG
QIPVKLGLQVKAGRCINKPNPNKNTKAPSPALTAPALWFGPRQDGKVQMYSASVSTYPDSSSSKIFLQNLSRNDDKNKPG
RYSLKPLSENEIKSKEPRFNGRQTVIRLDSGVQLIKLNGSKDEVVIFGNNGNNGTFGIVKEANVNLEADEWKKVLLPWTV
RGPDNDNKFKLINQKPDRYSQRYRIRENGNRDLGDIVNSPIVAVGGYLATSANDGMVHIFKKTGTDERSYNLKLSYIPGT
MERKDIEGNDSDLAKELRTFAEKGYVGDRYGVDGGFVLRQVNLNGQDRVFMFGAMGLGGRGAYALDLSKINENYPAAAPL
FDVKNGDKNGKNRVEVELGYTVGTPQIGKTRSGKYAAFLASGYAAKDIGSGDNKTALYVYDLNNTLGTPIAKIEVKDGKG
GLSSPTLVDKDLDGTVDIAYAGDRGGNMYRFDLSNSDPNKWSVRTIFEGTKPITSAPAVSRLKDKRVVIFGTGSDLTEDD
VLDTKEQYIYGIFDDDKAANNVNASRGVLGSGLLEQHLTQENKTLFLNKRSDGSGSKGWAVKLTGGRRVTVKPTVVLRTA
FVTIRKYKDDGCGAETAILGINTADGGALTPRSARPIVPDHNSVAQYSGHKKTAGGKSVPIGCMEKGGKTVCPNGYVYDK
PVNVRYLDETETDGFSTTADGDAGGSGIDPAGRRPGKNNRCFSKKGVRTLLMNDLDSLDITGPMCGIKRLSWREVFF

Nucleotide

• Length: 3114 bp

>NTDB_id=600286 NDL72_RS10290 WP_263587421.1 1937693..1940806(+) (pilC) [Neisseria gonorrhoeae strain 10536]
ATGAATAAAACTTTGAAACGGCAGGTTTTCCGCCATACCGCACTTTATGCCGCCATCTTGATGTTTTCCCATACCGGCGG
GGGGGGGGGGGGGGGGGCGATGGCGCAAACCCGTCAATACGCTATTGTCATGAACAAACGAAATCAGCCGGAGGTAAAGT
GGGATGGGCAATATCAAAAATCACAATTAAGGGAAAAAGACGGGGAACGCAAATTTATCTATACGAACCAGAGAAACAAG
TTGGGCCAACAAAACAATTTTATCTCATTCGACAATACCGATGAGCTTGTTTCCCGACAAAGCGGTACTGCCGTTTTTGG
CACAGCCACCTACCTGCCGCCCTACGGCAAGGTTTCCGGTTTTGATACCGATAGGCTGAAAAAGCGCAACAATGCCGTTG
ATTGGATTCGTACCACCCGCATCGCGCTGGCAGGCTACAGCTACGAAGGTGTCGTATGCAGAAGCGGCACAGGCTGTCCC
AAACTTGTCTATAAAACCCGATTTTCCTTCGATAATCCCGACTTGGTAAAAAATGCGGGCAAGCTGGATAGGTACACAGA
CCTAAGCCGCGAAAATTCGCCCATTTACAAATTGAAGGATTATCCATGGTTGGGCGTGTCTTTCAATTTGGGCGCCGAGG
GTACCGACAAAGATGGCAGATCACCCAACAAATTGGTATCTTCTTTTGATGAAAACAATAGTAATAGTAATCAAAACCTC
GTCTATACGACAGAAGGCCACCCTATTTCCCTTGGCGGCTCGCAGCGCGAACATACCGCCGTGGCCTATTATCTGAACGC
CAAACTGCACCTGCTGGATAAAAAAGGGATTGGAGATATCGCGCCAGGCAAAACAGTGCGGTTGGGTCTCTTGAAGCCGA
GCATCGATGTGCGGAAAGGAAATACGGGGCTTAGCGGCATTCTATCTTTTAATGCTACGTGGGACATTAAAGATACCGGG
CAGATTCCGGTCAAGCTCGGCCTGCAAGTCAAAGCAGGCCGCTGCATCAATAAACCGAACCCCAATAAGAATACCAAAGC
CCCTTCGCCGGCACTGACCGCCCCCGCGCTGTGGTTCGGACCTAGGCAAGATGGTAAGGTGCAGATGTATTCCGCTTCGG
TTTCCACCTACCCCGACAGTTCGAGCAGCAAAATTTTCCTGCAAAACCTTTCCCGCAATGATGACAAAAACAAACCGGGC
CGCTATTCCCTCAAACCCTTGAGTGAGAATGAGATTAAAAGTAAAGAGCCGCGTTTCAACGGAAGGCAGACCGTCATCCG
ATTGGATAGCGGCGTACAGCTGATCAAACTGAATGGAAGCAAGGATGAGGTCGTCATTTTTGGAAACAACGGCAACAACG
GCACTTTCGGCATTGTTAAGGAAGCGAACGTCAATCTTGAAGCCGACGAGTGGAAAAAAGTGCTGCTGCCTTGGACGGTT
CGGGGTCCCGATAATGACAATAAATTTAAATTAATTAACCAAAAACCAGACAGATACAGCCAAAGATACCGCATCCGCGA
AAACGGCAATCGCGATTTGGGCGACATCGTCAACAGCCCGATTGTCGCGGTCGGCGGGTATCTGGCAACTTCTGCCAACG
ACGGGATGGTGCATATCTTCAAAAAAACCGGCACGGATGAACGCAGCTACAATCTGAAGCTCAGCTACATCCCCGGTACG
ATGGAGCGTAAGGATATTGAAGGCAATGACTCCGACCTCGCCAAAGAGCTGCGCACCTTTGCCGAAAAAGGCTATGTGGG
CGACCGCTACGGCGTGGACGGCGGCTTTGTCTTGCGTCAAGTTAACTTAAACGGACAAGACCGCGTGTTTATGTTCGGCG
CAATGGGCCTTGGCGGCAGAGGCGCATACGCCTTGGATTTAAGCAAAATCAACGAAAATTATCCAGCCGCCGCTCCCCTG
TTTGATGTCAAAAATGGCGATAAAAACGGCAAAAATCGCGTGGAAGTGGAATTAGGCTACACCGTCGGTACGCCGCAAAT
CGGCAAAACCCGCAGCGGCAAATACGCCGCCTTCCTCGCTTCCGGTTATGCGGCTAAAGATATTGGCAGCGGCGATAATA
AAACCGCGCTGTATGTATATGATTTGAACAACACCTTAGGTACGCCGATTGCAAAAATCGAAGTGAAGGACGGCAAAGGC
GGGCTTTCGTCCCCCACGCTGGTGGATAAAGATTTGGACGGCACGGTCGATATCGCCTATGCCGGCGACCGGGGCGGCAA
TATGTACCGCTTTGATTTGAGCAATTCCGATCCTAATAAATGGTCTGTAAGGACTATTTTCGAAGGCACAAAACCGATTA
CCTCCGCGCCCGCCGTTTCCCGACTGAAAGACAAACGCGTCGTCATCTTCGGTACGGGCAGCGATTTGACCGAAGATGAT
GTACTCGATACGAAAGAACAATATATTTACGGTATCTTTGACGACGATAAGGCGGCGAATAATGTAAATGCAAGCCGCGG
CGTTTTGGGGAGCGGGCTGCTCGAGCAACACCTTACTCAGGAAAATAAAACATTATTCCTGAACAAGAGATCCGACGGTT
CGGGCAGCAAGGGCTGGGCGGTGAAATTGACAGGCGGACGGCGCGTTACCGTCAAACCGACCGTGGTATTGCGTACCGCC
TTCGTAACCATCCGCAAATATAAAGACGACGGCTGCGGCGCGGAAACCGCCATTTTGGGCATCAATACCGCCGACGGCGG
CGCATTGACTCCGAGAAGCGCGCGCCCGATTGTGCCGGATCACAATTCGGTTGCGCAATATTCCGGCCATAAGAAAACCG
CCGGCGGCAAGTCCGTCCCTATAGGTTGTATGGAAAAAGGCGGTAAAACCGTCTGCCCGAACGGATATGTTTACGACAAG
CCGGTTAATGTGCGTTATCTGGATGAAACGGAAACAGACGGATTTTCAACGACGGCGGACGGCGATGCGGGCGGCAGCGG
TATAGACCCCGCCGGCAGGCGTCCCGGCAAAAACAACCGCTGCTTCTCCAAAAAAGGTGTGCGCACCCTGCTGATGAACG
ATTTGGACAGCTTGGATATTACCGGCCCGATGTGCGGTATCAAACGCTTAAGCTGGCGCGAAGTCTTCTTCTGA

Domains

Predicted by InterProScan.

• Neisseria PilC beta-propeller domain (T4P_PilY1) (513-848)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilC	Neisseria meningitidis A1493	72.212	100	0.737