Detailed information NTG0600283

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: NDL72_RS09500
• Genome accession: NZ_CP098505
• Coordinates: 1793012..1794265 (-)
• Length: 417 a.a.
• NCBI ID: WP_047919725.1
• Uniprot ID: -
• Organism: Neisseria gonorrhoeae strain 10536
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1788012..1799265

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NDL72_RS12135	-	1788154..1788592 (-)	439	Protein_1826	hypothetical protein	-
NDL72_RS09470 (NDL72_09430)	-	1788853..1789224 (+)	372	Protein_1827	pilin	-
NDL72_RS09480 (NDL72_09440)	lpxC	1789938..1790861 (+)	924	WP_003687007.1	UDP-3-O-acyl-N-acetylglucosamine deacetylase	-
NDL72_RS09485 (NDL72_09445)	-	1790989..1791419 (+)	431	Protein_1829	pilin	-
NDL72_RS09490 (NDL72_09450)	-	1792031..1792741 (+)	711	WP_050156024.1	opacity family porin	-
NDL72_RS09495 (NDL72_09455)	-	1792755..1792946 (+)	192	WP_172762639.1	hypothetical protein	-
NDL72_RS09500 (NDL72_09460)	pilA	1793012..1794265 (-)	1254	WP_047919725.1	signal recognition particle-docking protein FtsY	Machinery gene
NDL72_RS09505 (NDL72_09465)	msrAB	1794411..1795979 (+)	1569	WP_260247250.1	bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB	-
NDL72_RS09510 (NDL72_09470)	-	1796063..1796545 (-)	483	WP_003694396.1	CinA family protein	-
NDL72_RS09515 (NDL72_09475)	-	1796572..1797420 (-)	849	WP_003687000.1	mechanosensitive ion channel family protein	-
NDL72_RS09520 (NDL72_09480)	-	1797514..1798515 (-)	1002	WP_003691948.1	thiamine ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 417 a.a.
• Molecular weight: 44359.71 Da
• Isoelectric Point: 4.8123

>NTDB_id=600283 NDL72_RS09500 WP_047919725.1 1793012..1794265(-) (pilA) [Neisseria gonorrhoeae strain 10536]
MFSFFRRKKKQETPALEEAQVQETAAKVESEVAQIVGNIKEDVESLAESVKGRAESAVETVSGAVEQVKETVAEMPSEAG
EAAERVESAKEAVAETVGEAVGQVQEAVATTEEHKLGWAARLKQGLAKSRDKMAKSLAGVFGGGQIGEDLYEELETVLIT
GDMGMEATEYLMKDVRDRVSLKGLKDGNELRGALKEALYDLIKPLEKPLVLPETKEPFVIMLAGINGAGKTTSIGKLAKY
FQAQGKSVLLAAGDTFRAAAREQLQAWGGRNNVTVISQTAGDSAAVCFDAVQAAKARGIDIVLADTAGRLPTQLHLMEEI
KKVKRVLQKAIPGAPHEIIVVLDANIGQNAVNQVKAFDDALGLTGLIVTKLDGTAKGGILAALASDRPVPVRYIGVGEGI
DDLRPFDARAFVDALLD

Nucleotide

• Length: 1254 bp

>NTDB_id=600283 NDL72_RS09500 WP_047919725.1 1793012..1794265(-) (pilA) [Neisseria gonorrhoeae strain 10536]
ATGTTCAGCTTCTTCCGTCGCAAGAAAAAACAGGAAACGCCGGCTCTCGAGGAGGCCCAAGTTCAGGAAACCGCAGCAAA
AGTAGAATCTGAAGTTGCTCAAATAGTTGGAAATATTAAAGAAGATGTCGAATCTTTAGCAGAAAGCGTCAAAGGGCGGG
CCGAATCTGCCGTTGAAACCGTCAGCGGTGCGGTTGAACAGGTAAAGGAAACCGTTGCCGAGATGCCGTCTGAAGCAGGG
GAAGCGGCGGAACGCGTTGAATCCGCAAAAGAAGCTGTTGCCGAAACCGTCGGCGAGGCTGTCGGGCAAGTTCAAGAAGC
CGTTGCGACAACTGAAGAACACAAGCTCGGTTGGGCTGCGCGTTTGAAACAAGGCTTGGCCAAATCACGCGACAAAATGG
CGAAATCGCTGGCCGGCGTGTTCGGCGGCGGACAAATCGGCGAGGATTTGTACGAAGAGCTGGAAACCGTGCTGATTACC
GGCGATATGGGCATGGAGGCCACCGAATACCTGATGAAAGACGTGCGCGACCGCGTCAGCCTCAAAGGGCTGAAAGACGG
CAACGAATTGCGCGGCGCGTTGAAAGAAGCCTTGTACGACCTGATTAAGCCGTTGGAAAAACCGCTGGTCTTGCCCGAAA
CTAAAGAGCCTTTCGTGATTATGCTTGCCGGTATCAACGGCGCGGGCAAAACCACGTCTATCGGCAAACTCGCCAAATAT
TTCCAAGCGCAGGGCAAATCCGTATTGCTGGCGGCAGGCGATACTTTCCGCGCCGCCGCGCGCGAGCAGCTTCAGGCTTG
GGGCGGGCGCAACAATGTGACCGTGATTTCACAAACTGCGGGCGATTCCGCCGCCGTGTGCTTCGATGCCGTCCAAGCCG
CGAAAGCGCGCGGGATCGACATCGTGCTTGCCGACACCGCCGGCCGCCTGCCCACGCAGCTTCATTTGATGGAAGAAATC
AAAAAAGTGAAGCGCGTGCTGCAAAAAGCCATTCCCGGCGCGCCGCACGAAATCATCGTCGTACTCGATGCCAATATCGG
GCAAAACGCCGTCAACCAAGTCAAAGCCTTTGACGACGCATTGGGGCTGACGGGGCTTATCGTTACCAAACTCGACGGCA
CGGCAAAAGGCGGCATCCTCGCCGCGCTTGCTTCCGACCGCCCCGTCCCCGTCCGCTACATCGGCGTGGGCGAAGGCATA
GACGACCTGCGCCCGTTTGACGCGCGCGCGTTTGTGGACGCACTGCTGGATTGA

Domains

Predicted by InterProScan.

• SRP54-type protein, GTPase domain (SRP54) (217-416)

• SRP54-type protein, helical bundle domain (SRP54_N) (132-198)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	99.52	100	0.995