Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   K6973_RS10585 Genome accession   NZ_CP082206
Coordinates   2148992..2149705 (+) Length   237 a.a.
NCBI ID   WP_002982243.1    Uniprot ID   A0A9X5LXW4
Organism   Streptococcus dysgalactiae strain DY107     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2143992..2154705
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K6973_RS10575 (K6973_10575) treC 2145061..2146689 (-) 1629 WP_218654916.1 alpha,alpha-phosphotrehalase -
  K6973_RS10580 (K6973_10580) treP 2146756..2148781 (-) 2026 Protein_2047 PTS system trehalose-specific EIIBC component -
  K6973_RS10585 (K6973_10585) treR 2148992..2149705 (+) 714 WP_002982243.1 trehalose operon repressor Regulator
  K6973_RS10590 (K6973_10590) - 2149987..2150325 (-) 339 WP_115245526.1 helix-turn-helix domain-containing protein -
  K6973_RS10595 (K6973_10595) - 2150511..2151365 (+) 855 WP_218654918.1 VOC family protein -
  K6973_RS10600 (K6973_10600) yaaA 2151407..2152138 (+) 732 WP_218654919.1 peroxide stress protein YaaA -
  K6973_RS10605 (K6973_10605) nrdG 2152310..2152924 (-) 615 WP_138126782.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  K6973_RS10610 (K6973_10610) - 2152928..2153431 (-) 504 WP_222819385.1 GNAT family N-acetyltransferase -
  K6973_RS10615 (K6973_10615) - 2153440..2154375 (-) 936 WP_218654920.1 Gfo/Idh/MocA family oxidoreductase -
  K6973_RS10620 (K6973_10620) - 2154404..2154550 (-) 147 WP_164714882.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27592.78 Da        Isoelectric Point: 9.6226

>NTDB_id=600128 K6973_RS10585 WP_002982243.1 2148992..2149705(+) (treR) [Streptococcus dysgalactiae strain DY107]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIKHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=600128 K6973_RS10585 WP_002982243.1 2148992..2149705(+) (treR) [Streptococcus dysgalactiae strain DY107]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATCAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAGTACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCGCTTCTCACAAAGGCTG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAAGCATCATCAGATCATGTTCCCCATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTAACCGGTTTTAGCAAAAACAGTTTGGTCTGGCGTGTTACGCGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATCTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
CAAAATTTTACTTGACCTTGGCTCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.803

98.734

0.679